Species and Domains UMAPs| Compare Groups of Species| Cluster by Species

Alphabetical List of Domains

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ABCDEFGHIJKLMNOPQRSTUVWXYZ





Domains (1919)
PFAM UNIPROT
PF00024PAN_1PAN domainP03952
PF00067p450Cytochrome P450O87605
PF00068Phospholip_A2_1Phospholipase A2Q90249
PF00069PkinaseProtein kinase domainP24941
PF00070Pyr_redoxPyridine nucleotide-disulphide oxidoreductaseP9WHH9
PF00082Peptidase_S8Subtilase familyP06873
PF00112Peptidase_C1Papain family cysteine proteaseP00784
PF00114PilinPilin (bacterial filament)P18774
PF00124Photo_RCPhotosynthetic reaction centre proteinB4WKI3
PF00141peroxidasePeroxidaseC5WNL8
PF00156PribosyltranPhosphoribosyl transferase domainP0A9M2
PF00157PouPou domain - N-terminal to homeobox domainP20265
PF00160Pro_isomeraseCyclophilin type peptidyl-prolyl cis-trans isomerase/CLDA0A0R3QSA7
PF00162PGKPhosphoglycerate kinaseA0QHY4
PF00169PHPH domainQ62717
PF00223PsaA_PsaBPhotosystem I psaA/psaB proteinQ8KAY0
PF00224PKPyruvate kinase, barrel domainP14618
PF00227ProteasomeProteasome subunitP9WHU1
PF00233PDEase_I3'5'-cyclic nucleotide phosphodiesteraseQ9Y233
PF00235ProfilinProfilinQ9STB6
PF00246Peptidase_M14Zinc carboxypeptidaseP00730
PF00260Protamine_P1Protamine P1
PF00267Porin_1Gram-negative porinP02931
PF00280potato_inhibitPotato inhibitor I familyA0A166C3G6
PF00282Pyridoxal_deCPyridoxal-dependent decarboxylase conserved domainA5YKJ2
PF00291PALPPyridoxal-phosphate dependent enzymeA0A0H2US33
PF00292PAX'Paired box' domainP26367
PF00294PfkBpfkB family carbohydrate kinaseA0A140N873
PF00311PEPcasePhosphoenolpyruvate carboxylaseP04711
PF00326Peptidase_S9Prolyl oligopeptidase familyQ86TI2
PF00341PDGFPDGF/VEGF domainP15692
PF00342PGIPhosphoglucose isomeraseQ4X1J1
PF00343PhosphorylaseCarbohydrate phosphorylaseP00489
PF00345PapD_NPili and flagellar-assembly chaperone, PapD N-terminal domainP31697
PF00348polyprenyl_syntPolyprenyl synthetaseA2PZA5
PF00354PentaxinPentaxin familyQ8IZF6
PF00358PTS_EIIA_1phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1P69783
PF00359PTS_EIIA_2Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2Q3JW77
PF00360PHYPhytochrome regionQ9RZA4
PF00361Proton_antipo_MNADH:quinone oxidoreductase/Mrp antiporter, TMA0QU23
PF00365PFKPhosphofructokinaseP17858
PF00367PTS_EIIBphosphotransferase system, EIIBQ188R0
PF00377PrionPrion/Doppel alpha-helical domainP04925
PF00381PTS-HPrPTS HPr component phosphorylation siteB8I8F1
PF00387PI-PLC-YPhosphatidylinositol-specific phospholipase C, Y domainP10686
PF00388PI-PLC-XPhosphatidylinositol-specific phospholipase C, X domainP10686
PF00391PEP-utilizersPEP-utilising enzyme, mobile domainQ8R7R4
PF00399PIRYeast PIR protein repeat
PF00408PGM_PMM_IVPhosphoglucomutase/phosphomannomutase, C-terminal domainQ8DHI3
PF00413Peptidase_M10MatrixinP03956
PF00421PSIIPhotosystem II proteinB4WKI2
PF00427PBS_linker_polyPhycobilisome Linker polypeptideA0A5J4YI31
PF00432PrenyltransPrenyltransferase alpha-alpha toroid domainQ02293
PF00433Pkinase_CProtein kinase C terminal domainO00141
PF00450Peptidase_S10Serine carboxypeptidaseP16675
PF00454PI3_PI4_kinasePhosphatidylinositol 3- and 4-kinaseQ9Y4A5
PF00481PP2CProtein phosphatase 2CQ9ULR3
PF00484Pro_CACarbonic anhydraseP61517
PF00485PRKPhosphoribulokinase / Uridine kinase familyQ9C9B9
PF00502PhycobilisomePhycobilisome proteinP11393
PF00519PPV_E1_CPapillomavirus helicaseP03116
PF00524PPV_E1_NE1 Protein, N terminal domain
PF00532Peripla_BP_1Periplasmic binding proteins and sugar binding domain of LacI familyP02924
PF00543P-IINitrogen regulatory protein P-IIQ60381
PF00544Pectate_lyase_4Pectate lyaseG2X3Y1
PF00550PP-bindingPhosphopantetheine attachment siteQ76KY0
PF00557Peptidase_M24Metallopeptidase family M24Q03862
PF00564PB1PB1 domainQ13501
PF00589Phage_integrasePhage integrase familyP06956
PF00595PDZPDZ domainP0C0V0
PF00613PI3KaPhosphoinositide 3-kinase family, accessory domain (PIK domain)P42336
PF00614PLDcPhospholipase D Active site motifQ9HYC2
PF00628PHDPHD-fingerQ5VWG9
PF00640PIDPhosphotyrosine interaction domain (PTB/PID)P98082
PF00644PARPPoly(ADP-ribose) polymerase catalytic domainQ9H2K2
PF00648Peptidase_C2Calpain family cysteine proteaseA0A2K3D425
PF00656Peptidase_C14Caspase domainP42574
PF00659POLO_boxPOLO box duplicated regionP53350
PF00662Proton_antipo_NNADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminusA0QU25
PF00675Peptidase_M16Insulinase (Peptidase family M16)A0A1S3VF71
PF00681PlectinPlectin repeatP15924
PF00697PRAIN-(5'phosphoribosyl)anthranilate (PRA) isomeraseP06560
PF00705PCNA_NProliferating cell nuclear antigen, N-terminal domainP15873
PF00717Peptidase_S24Peptidase S24-likeQ7B004
PF00719PyrophosphataseInorganic pyrophosphataseP00817
PF00737PsbHPhotosystem II 10 kDa phosphoproteinB4WKI0
PF00740Parvo_coatParvovirus coat protein VP2Q9WBP8
PF00768Peptidase_S11D-alanyl-D-alanine carboxypeptidaseA0A0H2WY27
PF00770Peptidase_C5Adenovirus endoproteaseP03252
PF00786PBDP21-Rho-binding domainQ91YD9
PF00787PXPX domainP32913
PF00792PI3K_C2Phosphoinositide 3-kinase C2P42336
PF00794PI3K_rbdPI3-kinase family, ras-binding domainP42336
PF00796PSI_8Photosystem I reaction centre subunit VIIIA8IFG7
PF00800PDTPrephenate dehydrataseA0A0M0ELU2
PF00801PKDPKD domainP18056
PF00805PentapeptidePentapeptide repeats (8 copies)A0QSY0
PF00806PUFPumilio-family RNA binding repeatQ09312
PF00809Pterin_bindPterin binding enzymeQ1ENB6
PF00821PEPCK_GTPPhosphoenolpyruvate carboxykinase C-terminal P-loop domainP07379
PF00822PMP22_ClaudinPMP-22/EMP/MP20/Claudin familyQ8VHX0
PF00823PPEPPE familyQ79FE1
PF00841Protamine_P2Sperm histone P2
PF00849PseudoU_synth_2RNA pseudouridylate synthaseP33643
PF00854PTR2POT familyP39276
PF00855PWWPPWWP domainP52701
PF00864P2X_receptorATP P2X receptorQ64663
PF00870P53P53 DNA-binding domainP04637
PF00874PRDPRD domainP39805
PF00883Peptidase_M17Cytosol aminopeptidase family, catalytic domainQ8IL11
PF00922PhosphoproteinVesiculovirus phosphoproteinP03520
PF00934PEPE familyI6X486
PF00944Peptidase_S3Alphavirus core proteinQ5Y388
PF00949Peptidase_S7Peptidase S7, Flavivirus NS3 serine proteaseQ32ZE1
PF00959Phage_lysozymePhage lysozymeA0A7S9SVX7
PF00989PASPAS foldP30561
PF01010Proton_antipo_CNADH-dehyrogenase subunit F, TMs, (complex I) C-terminusP56752
PF01011PQQPQQ enzyme repeatP77774
PF01048PNP_UDP_1Phosphorylase superfamilyW9BAW3
PF01057Parvo_NS1Parvovirus non-structural protein NS1P03132
PF01080PresenilinPresenilinP49810
PF01088Peptidase_C12Ubiquitin carboxyl-terminal hydrolase, family 1Q92560
PF01091PTN_MK_CPTN/MK heparin-binding protein family, C-terminal domainP21246
PF01095PectinesterasePectinesteraseG3YAL0
PF01135PCMTProtein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)Q8ZYN0
PF01136Peptidase_U32Peptidase family U32Q8TWX5
PF01161PBPPhosphatidylethanolamine-binding proteinQ96DV4
PF01190Pollen_Ole_e_1Pollen protein Ole e 1 likeO82015
PF01195Pept_tRNA_hydroPeptidyl-tRNA hydrolaseB4RK78
PF01238PMI_typeI_CPhosphomannose isomerase type I C-terminalP25081
PF01239PPTAProtein prenyltransferase alpha subunit repeatQ04631
PF01241PSI_PSAKPhotosystem I psaG / psaKP14225
PF01242PTPS6-pyruvoyl tetrahydropterin synthaseA0A081GYS3
PF01243PNPOx_NPyridoxamine 5'-phosphate oxidaseQ9A0B9
PF01244Peptidase_M19Membrane dipeptidase (Peptidase family M19)Q9H4B8
PF01252Peptidase_A8Signal peptidase (SPase) IIQ6GHN9
PF01255PrenyltransfPutative undecaprenyl diphosphate synthaseQ8TPS4
PF01279ParathyroidParathyroid hormone familyP01270
PF01293PEPCK_ATPPhosphoenolpyruvate carboxykinaseP22259
PF01307Plant_vir_protPlant viral movement protein
PF01326PPDK_NPyruvate phosphate dikinase, AMP/ATP-binding domainP22221
PF01327Pep_deformylasePolypeptide deformylaseP0A6K3
PF01328Peroxidase_2Peroxidase, family 2P04963
PF01329Pterin_4aPterin 4 alpha carbinolamine dehydrataseQ9CZL5
PF01343Peptidase_S49Peptidase family S49O34525
PF01358PARP_regulatoryPoly A polymerase regulatory subunitP07617
PF01364Peptidase_C25Peptidase family C25B2RGP6
PF01366PRTPHerpesvirus processing and transport proteinP10212
PF01379Porphobil_deamPorphobilinogen deaminase, dipyromethane cofactor binding domainP08397
PF01384PHO4Phosphate transporter familyQ9WY99
PF01395PBP_GOBPPBP/GOBP familyF5ANH9
PF01399PCIPCI domainQ9UNM6
PF01401Peptidase_M2Angiotensin-converting enzymeQ9BYF1
PF01405PsbTPhotosystem II reaction centre T proteinA0A2W4UG77
PF01416PseudoU_synth_1tRNA pseudouridine synthaseQ12211
PF01427Peptidase_M15D-ala-D-ala dipeptidaseQ06241
PF01431Peptidase_M13Peptidase family M13I6X8R2
PF01432Peptidase_M3Peptidase family M3Q9BYT8
PF01433Peptidase_M1Peptidase family M1 domainO96935
PF01434Peptidase_M41Peptidase family M41P0AAI3
PF01435Peptidase_M48Peptidase family M48P66948
PF01437PSIPlexin repeatA0A0G2JZC4
PF01447Peptidase_M4Thermolysin metallopeptidase, catalytic domainP00800
PF01457Peptidase_M8LeishmanolysinP08148
PF01459Porin_3Eukaryotic porinP23644
PF01469Pentapeptide_2Pentapeptide repeats (8 copies)
PF01470Peptidase_C15Pyroglutamyl peptidaseA0A1B0VKK9
PF01471PG_binding_1Putative peptidoglycan binding domainA0A222A2P4
PF01472PUAPUA domainO60832
PF01477PLATPLAT/LH2 domainP09917
PF01478Peptidase_A24Type IV leader peptidase familyA9A677
PF01480PWIPWI domainQ8IYB3
PF01483P_proproteinProprotein convertase P-domainP09958
PF01497Peripla_BP_2Periplasmic binding proteinO53291
PF01502PRA-CHPhosphoribosyl-AMP cyclohydrolaseA0A072U2X9
PF01503PRA-PHPhosphoribosyl-ATP pyrophosphohydrolaseA0A072U2X9
PF01504PIP5KPhosphatidylinositol-4-phosphate 5-KinaseQ8TBX8
PF01507PAPS_reductPhosphoadenosine phosphosulfate reductase familyA0A2H0ZDA4
PF01508Paramecium_SAParamecium surface antigen domain
PF01515PTA_PTBPhosphate acetyl/butaryl transferaseP58255
PF01518PolyG_polSigma NS protein
PF01522Polysacc_deac_1Polysaccharide deacetylaseQ8RBF4
PF01523PmbA_TldD_1stPmbA/TldA metallopeptidase domain 1Q5JD94
PF01535PPRPPR repeatC9ZIL7
PF01546Peptidase_M20Peptidase family M20/M25/M40A3M8H2
PF01551Peptidase_M23Peptidase family M23A0A1J6PWI8
PF01558PORPyruvate ferredoxin/flavodoxin oxidoreductaseP94692
PF01562Pep_M12B_propepReprolysin family propeptide
PF01569PAP2PAP2 superfamilyA0A0D6FFE3
PF01619Pro_dhProline dehydrogenaseF7X6I3
PF01620Pollen_allerg_2Ribonuclease (pollen allergen)P43215
PF01625PMSRPeptide methionine sulfoxide reductaseP0A744
PF01640Peptidase_C10Peptidase C10 familyP0C0J0
PF01650Peptidase_C13Peptidase C13 familyQ99538
PF01663PhosphodiestType I phosphodiesterase / nucleotide pyrophosphataseQ64610
PF01672Plasmid_partiPutative plasmid partition protein
PF01679Pmp3Proteolipid membrane potential modulatorQ8KG87
PF01690PLRV_ORF5Potato leaf roll virus readthrough proteinQ8QYP3
PF01701PSI_PsaJPhotosystem I reaction centre subunit IX / PsaJP59777
PF01734PatatinPatatin-like phospholipaseA0A3L7I2I8
PF01735PLA2_BLysophospholipase catalytic domainQ86XP0
PF01742Peptidase_M27Clostridial neurotoxin zinc proteaseP0DPK1
PF01743PolyA_polPoly A polymerase head domainA0A1C7DQ98
PF01752Peptidase_M9CollagenaseQ9X721
PF01788PsbJPsbJP59087
PF01789PsbPPsbPO80634
PF01804Penicil_amidasePenicillin amidaseP07941
PF01828Peptidase_A4Peptidase A4 familyP24665
PF01850PINPIN domainP9WF55
PF01851PC_repProteasome/cyclosome repeatQ13200
PF01855POR_NPyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdgP94692
PF01862PvlArgDCPyruvoyl-dependent arginine decarboxylase (PvlArgDC)Q57764
PF01865PhoU_divProtein of unknown function DUF47Q89YU3
PF01884PcrBPcrB familyQ97AR4
PF01885PTS_2-RNARNA 2'-phosphotransferase, Tpt1 / KptA familyA0A7U3ZK32
PF01895PhoUPhoU domainQ51547
PF01920Prefoldin_2Prefoldin subunitO15212
PF01943Polysacc_syntPolysaccharide biosynthesis protein
PF01948PyrIAspartate carbamoyltransferase regulatory chain, allosteric domainP0A7F3
PF01981PTH2Peptidyl-tRNA hydrolase PTH2O28185
PF02006PPS_PSPhosphopantothenate/pantothenate synthetaseB6YXQ1
PF02016Peptidase_S66LD-carboxypeptidase N-terminal domainC3XA61
PF02031Peptidase_M7Streptomyces extracellular neutral proteinase (M7) familyP56406
PF02073Peptidase_M29Thermophilic metalloprotease (M29)A0A0H2UN95
PF02074Peptidase_M32Carboxypeptidase Taq (M32) metallopeptidaseQ5SLM3
PF02089Palm_thioestPalmitoyl protein thioesteraseP50897
PF02102Peptidase_M35Deuterolysin metalloprotease (M35) familyP46076
PF02112PDEase_IIcAMP phosphodiesterases class-IIP22434
PF02113Peptidase_S13D-Ala-D-Ala carboxypeptidase 3 (S13) familyQ6MPN2
PF02114PhosducinPhosducinQ9H2J4
PF02122Peptidase_S39Peptidase S39Q9EB08
PF02126PTEPhosphotriesterase familyP0A434
PF02127Peptidase_M18Aminopeptidase I zinc metalloprotease (M18)Q2HJH1
PF02128Peptidase_M36Fungalysin metallopeptidase (M36)M1UZ70
PF02129Peptidase_S15X-Pro dipeptidyl-peptidase (S15 family)Q9L9D7
PF02153PDH_NPrephenate dehydrogenase, nucleotide-binding domainQ81P63
PF02160Peptidase_A3Cauliflower mosaic virus peptidase (A3)
PF02161Prog_receptorProgesterone receptor
PF02163Peptidase_M50Peptidase family M50P0C0V0
PF02170PAZPAZ domainQ9VCU9
PF02171PiwiPiwi domainQ9XGW1
PF02173pKIDpKID domainP16220
PF02192PI3K_p85BPI3-kinase family, p85-binding domainP42336
PF02194PXAPXA domain
PF02195ParBcParB/Sulfiredoxin domainP37524
PF02225PAPA domainP93026
PF02226Pico_P1APicornavirus coat protein (VP4)A0A291S400
PF02229PC4Transcriptional Coactivator p15 (PC4)P53999
PF02233PNTBNAD(P) transhydrogenase beta subunitW5PFI3
PF02244Propep_M14Carboxypeptidase activation peptideQ96IY4
PF02245Pur_DNA_glycoMethylpurine-DNA glycosylase (MPG)P29372
PF02251PA28_NProteasome activator PA28, N-terminalQ06323
PF02252PA28_CProteasome activator PA28, C-terminalQ06323
PF02253PLA1Phospholipase A1P0A232
PF02255PTS_IIAPTS system, Lactose/Cellobiose specific IIA subunitQ8DT03
PF02302PTS_IIBPTS system, Lactose/Cellobiose specific IIB subunitQ2G2B6
PF02303Phage_DNA_bindHelix-destabilising proteinP69544
PF02304Phage_BScaffold protein BP03633
PF02305Phage_FCapsid protein (F protein)A0A6G9L6B3
PF02306Phage_GMajor spike protein (G protein)P03643
PF02331P35Apoptosis preventing proteinP08160
PF02332Phenol_HydroxMethane/Phenol/Alkene HydroxylaseP22869
PF02333PhytasePhytaseO31097
PF02366PMTDolichyl-phosphate-mannose-protein mannosyltransferaseP31382
PF02378PTS_EIICPhosphotransferase system, EIICQ63GK8
PF02395Peptidase_S6Immunoglobulin A1 proteaseQ8VSL2
PF02419PsbLPsbL proteinB4WII3
PF02427PSI_PsaEPhotosystem I reaction centre subunit IV / PsaEP12352
PF02428Prot_inhib_IIPotato type II proteinase inhibitor familyT1PZ86
PF02429PCPPeridinin-chlorophyll A binding proteinP80484
PF02436PYC_OADAConserved carboxylase domainA0A2A9IR05
PF02452PemK_toxinPemK-like, MazF-like toxin of type II toxin-antitoxin systemL7PFJ6
PF02460PatchedPatched SSDQ61115
PF02468PsbNPhotosystem II reaction centre N protein (psbN)
PF02478Pneumo_phosprotPneumovirus phosphoproteinP03421
PF02503PP_kinasePolyphosphate kinase middle domainQ7MTR1
PF02507PSI_PsaFPhotosystem I reaction centre subunit IIIP12356
PF02529PetGCytochrome B6-F complex subunit 5P69461
PF02530Porin_2Porin subfamily
PF02531PsaDPsaDQ39615
PF02532PsbIPhotosystem II reaction centre I protein (PSII 4.8 kDa protein)B4WM03
PF02533PsbKPhotosystem II 4 kDa reaction centre componentB4WR12
PF02541Ppx-GppAPpx/GppA phosphatase familyB2RHQ2
PF02548Pantoate_transfKetopantoate hydroxymethyltransferaseQ2SYZ1
PF02562PhoHPhoH-like proteinQ8NNB6
PF02563Poly_exportPolysaccharide biosynthesis/export proteinP0A930
PF02567PhzC-PhzFPhenazine biosynthesis-like proteinQ51792
PF02569Pantoate_ligasePantoate-beta-alanine ligaseQ6G456
PF02585PIG-LGlcNAc-PI de-N-acetylaseA0A160VQZ8
PF02604PhdYeFM_antitoxAntitoxin Phd_YefM, type II toxin-antitoxin systemQ2FVF7
PF02605PsaLPhotosystem I reaction centre subunit XIA8IL32
PF02666PS_DcarbxylasePhosphatidylserine decarboxylaseP0A8K1
PF02671PAHPaired amphipathic helix repeatP22579
PF02678PirinPirinA0A3N4BQ10
PF02700PurSPhosphoribosylformylglycinamidine (FGAM) synthaseQ9X0X1
PF02719Polysacc_synt_2Polysaccharide biosynthesis proteinJ3UJH9
PF02725Paramyxo_NS_CNon-structural protein C
PF02747PCNA_CProliferating cell nuclear antigen, C-terminal domainP15873
PF02748PyrI_CAspartate carbamoyltransferase regulatory chain, metal binding domainP0A7F3
PF02753PapD_CPili assembly chaperone PapD, C-terminal domainP31697
PF02758PYRINPAAD/DAPIN/Pyrin domainQ96P20
PF02765POT1Telomeric single stranded DNA binding POT1/CDC13Q9NUX5
PF02789Peptidase_M17_NCytosol aminopeptidase family, N-terminal domainB4RJ22
PF02811PHPPHP domainP77766
PF02818PPAKPPAK motif
PF02827PKIcAMP-dependent protein kinase inhibitorP61925
PF02840Prp18Prp18 domainA0A6A5PX22
PF02852Pyr_redox_dimPyridine nucleotide-disulphide oxidoreductase, dimerisation domainP9WHH9
PF02868Peptidase_M4_CThermolysin metallopeptidase, alpha-helical domainP00800
PF02877PARP_regPoly(ADP-ribose) polymerase, regulatory domainP09874
PF02878PGM_PMM_IPhosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain IQ8DHI3
PF02879PGM_PMM_IIPhosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain IIQ8DHI3
PF02880PGM_PMM_IIIPhosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain IIIQ8DHI3
PF02887PK_CPyruvate kinase, alpha/beta domainP14618
PF02896PEP-utilizers_CPEP-utilising enzyme, PEP-binding domainP08839
PF02897Peptidase_S9_NProlyl oligopeptidase, N-terminal beta-propeller domainB3VI58
PF02899Phage_int_SAM_1Phage integrase, N-terminal SAM-like domainP03700
PF02901PFL-likePyruvate formate lyase-likeA0A316Q2B4
PF02902Peptidase_C48Ulp1 protease family, C-terminal catalytic domainQ9BQF6
PF02912Phe_tRNA-synt_NAminoacyl tRNA synthetase class II, N-terminal domainA0A0F7J874
PF02917Pertussis_S1Pertussis toxin, subunit 1P04977
PF02918Pertussis_S2S3Pertussis toxin, subunit 2 and 3, C-terminal domainQ8Z6A3
PF02983Pro_Al_proteaseAlpha-lytic protease prodomainP00778
PF02988PLA2_inhPhospholipase A2 inhibitor
PF02996PrefoldinPrefoldin subunitQ99471
PF03011PFEMPPFEMP1 DBL domainW7K270
PF03012PP_M1PhosphoproteinP15198
PF03013Pyr_excisePyrimidine dimer DNA glycosylaseP04418
PF03034PSSPhosphatidyl serine synthase
PF03036PerilipinPerilipin familyQ9DBG5
PF03051Peptidase_C1_2Peptidase C1-like familyQ13867
PF03063PrismanePrismane/CO dehydrogenase familyA0A1L8D0M5
PF03068PADProtein-arginine deiminase (PAD)Q9ULW8
PF03095PTPAPhosphotyrosyl phosphate activator (PTPA) proteinQ15257
PF03126Plus-3Plus-3 domainF2QQ42
PF03136Pup_ligasePup-ligase proteinA0LU48
PF03208PRA1PRA1 family protein
PF03209PUCCPUCC protein
PF03210Paramyx_P_V_CParamyxovirus P/V phosphoprotein C-terminalA0A0S2UXI9
PF03211Pectate_lyasePectate lyaseB9MKT4
PF03212PertactinPertactinO66044
PF03213Pox_P35Poxvirus P35 proteinP07240
PF03244PSI_PsaHPhotosystem I reaction centre subunit VIQ9SUI6
PF03245Phage_lysisBacteriophage Rz lysis protein
PF03247ProthymosinProthymosin/parathymosin family
PF03283PAEPectinacetylesteraseQ6P988
PF03284PHZA_PHZBPhenazine biosynthesis protein A/BQ396C9
PF03285ParalemminParalemmin
PF03288Pox_D5Poxvirus D5 protein-likeP21010
PF03290Peptidase_C57Vaccinia virus I7 processing peptidase
PF03309Pan_kinaseType III pantothenate kinaseB4E9P3
PF03332PMMEukaryotic phosphomannomutaseQ4E4A3
PF03333PapBAdhesin biosynthesis transcription regulatory proteinQ93K76
PF03334PhaG_MnhG_YufBNa+/H+ antiporter subunitA0A1Q9PMU8
PF03335Phage_fiberPhage tail fibre repeatP03744
PF03336Pox_C4_C10Poxvirus C4/C10 proteinP03296
PF03364Polyketide_cycPolyketide cyclase / dehydrase and lipid transportI7FVL6
PF03371PRP38PRP38 familyQ8NAV1
PF03403PAF-AH_p_IIPlatelet-activating factor acetylhydrolase, isoform IIW0TJ64
PF03406Phage_fiber_2Phage tail fibre repeatQ9T1V0
PF03411Peptidase_M74Penicillin-insensitive murein endopeptidaseP0C0T5
PF03412Peptidase_C39Peptidase C39 familyQ8FDZ8
PF03413PepSYPeptidase propeptide and YPEB domainD5DRI0
PF03415Peptidase_C11Clostripain familyQ8A9T8
PF03416Peptidase_C54Peptidase C54 catalytic domainQ9Y4P1
PF03418Peptidase_A25Germination proteaseP22321
PF03419Peptidase_U4Sporulation factor SpoIIGA
PF03420Peptidase_S77Prohead core protein serine proteaseP06807
PF03462PCRFPCRF domainP0A7I0
PF03479PCCPlants and Prokaryotes Conserved (PCC) domainQ46QL5
PF03535PaxillinPaxillin family
PF03543Peptidase_C58Yersinia/Haemophilus virulence surface antigenQ9CPH9
PF03551PadRTranscriptional regulator PadR-like familyA2RI36
PF03568Peptidase_C50Peptidase family C50Q14674
PF03571Peptidase_M49Peptidase family M49Q9NY33
PF03572Peptidase_S41Peptidase family S41Q9HU50
PF03574Peptidase_S48Peptidase family S48P27709
PF03575Peptidase_S51Peptidase family S51P73832
PF03576Peptidase_S58Peptidase family S58Q79F77
PF03577Peptidase_C69Peptidase family C69
PF03627PapG_NPapG carbohydrate binding domainQ47450
PF03628PapG_CPapG chaperone-binding domainQ47450
PF03656Pam16Pam16P42949
PF03660PHF5PHF5-like proteinQ7RTV0
PF03676PHAF1Phagosome assembly factor 1
PF03693ParD_antitoxinBacterial antitoxin of ParD toxin-antitoxin type II system and RHHA0A0U3H4C4
PF03714PUDBacterial pullanase-associated domainW9BQ28
PF03717PBP_dimerPenicillin-binding Protein dimerisation domainG1C6X4
PF03726PNPasePolyribonucleotide nucleotidyltransferase, RNA binding domainP05055
PF03740PdxJPyridoxal phosphate biosynthesis protein PdxJB2FT93
PF03742PetNPetNP61045
PF03759PRONEPRONE (Plant-specific Rop nucleotide exchanger)Q9LV40
PF03785Peptidase_C25_CPeptidase family C25, C terminal ig-like domainQ51817
PF03792PBCPBC domain
PF03793PASTAPASTA domainA0A0H3JLN5
PF03828PAP_assocCid1 family poly A polymeraseO64642
PF03829PTSIIA_gutAPTS system glucitol/sorbitol-specific IIA componentQ831B0
PF03830PTSIIB_sorbPTS system sorbose subfamily IIB componentA0A0H2USH8
PF03833PolC_DP2_NDNA polymerase II large subunit DP2, N-terminalQ9V2F4
PF03864Phage_cap_EPhage major capsid protein EP03713
PF03900Porphobil_deamCPorphobilinogen deaminase, C-terminal domainP08397
PF03903Phage_T4_gp36Phage T4 tail fibre
PF03906Phage_T7_tailPhage T7 tail fibre protein, N-terminalP03748
PF03912Psb28Psb28 proteinQ8DLJ8
PF03929PepSY_TMPepSY-associated TM regionQ9I117
PF03965Penicillinase_RPenicillinase repressorP06555
PF03967PRCHPhotosynthetic reaction centre, H-chain N-terminal regionP0C0Y7
PF03976PPK2Polyphosphate kinase 2 (PPK2)Q9RY20
PF03985Paf1Paf1C4R997
PF03991Prion_octapepCopper binding octapeptide repeat region
PF04012PspA_IM30PspA/IM30 familyQ55707
PF04020Phage_holin_4_2Mycobacterial 4 TMS phage holin, superfamily IV
PF04024PspCPspC domain
PF04043PMEIPlant invertase/pectin methylesterase inhibitorO49908
PF04045P34-ArcArp2/3 complex, 34 kD subunit p34-ArcO14241
PF04046PSPPSPQ13435
PF04062P21-ArcARP2/3 complex ARPC3 (21 kDa) subunitQ9Y7J4
PF04080Per1Per1-like family
PF04088Peroxin-13_NPeroxin 13, N-terminal region
PF04151PPCBacterial pre-peptidase C-terminal domainA0A6L8PLB2
PF04166PdxAPyridoxal phosphate biosynthetic protein PdxAQ3V872
PF04185PhosphoesterasePhosphoesterase familyQ9SRQ7
PF04191PEMTPhospholipid methyltransferase
PF04193PQ-loopPQ loop repeatO60931
PF04194PDCD2_CProgrammed cell death protein 2, C-terminal putative domain
PF04230PS_pyruv_transPolysaccharide pyruvyl transferaseA0A0C4KUT2
PF04233Phage_Mu_FPhage Mu protein F like protein
PF04258Peptidase_A22BSignal peptide peptidase
PF04272PhospholambanPhospholambanP61012
PF04275P-mevalo_kinasePhosphomevalonate kinaseQ15126
PF04303PrpFPrpF proteinQ0KJL4
PF04314PCuACCopper chaperone PCu(A)CA0A2D2CWX5
PF04327Peptidase_PrpCysteine protease PrpQ2FXS9
PF04350PilOPilus assembly protein, PilOQ51353
PF04351PilPPilus assembly protein, PilPQ7DD77
PF04352ProQProQ/FINO familyA0A128QHZ1
PF04371PAD_porphPorphyromonas-type peptidyl-arginine deiminaseG7JT50
PF04387PTPLAProtein tyrosine phosphatase-like protein, PTPLA
PF04389Peptidase_M28Peptidase family M28P02786
PF04403PqiAParaquat-inducible protein A
PF04411PDDEXK_7PD-(D/E)XK nuclease superfamily
PF04431Pec_lyase_NPectate lyase, N terminus
PF04468PSP1PSP1 C-terminal conserved region
PF04492Phage_rep_OBacteriophage replication protein O
PF04508Pox_A_type_incViral A-type inclusion protein repeat
PF04531Phage_holin_1Bacteriophage holin
PF04550Phage_holin_3_2Phage holin family 2
PF04586Peptidase_S78Caudovirus prohead serine protease
PF04608PgpAPhosphatidylglycerophosphatase AQ8Y4N7
PF04614Pex19Pex19 protein familyP40855
PF04630Phage_TTP_1Phage tail tube protein
PF04631PIF2Per os infectivity factor 2
PF04636PA26PA26 p53-induced protein (sestrin)P58004
PF04640PLATZPLATZ transcription factor
PF04663Phenol_monooxPhenol hydroxylase conserved regionQ84AQ1
PF04665Pox_A32Poxvirus A32 protein
PF04669PBDC1PBDC1 proteinQ08971
PF04674Phi_1Phosphate-induced protein 1 conserved region
PF04692PDGF_NPlatelet-derived growth factor, N terminal regionP04085
PF04695Pex14_NPex14 N-terminal domainA0A2V2WKZ5
PF04696Pinin_SDK_memApinin/SDK/memA/ protein conserved region
PF04697Pinin_SDK_Npinin/SDK conserved region
PF04699P16-ArcARP2/3 complex 16 kDa subunit (p16-Arc)Q10316
PF04707PRELIPRELI-like familyQ96N28
PF04710Pellino_FHAPellino, FHA domainQ9HAT8
PF04713Pox_I5Poxvirus protein I5
PF04717Phage_base_VType VI secretion system/phage-baseplate injector OB domainQ4K3N1
PF04720PDDEXK_6PDDEXK-like family of unknown function
PF04721PAWPNGase C-terminal domain, mannose-binding module PAWQ9JI78
PF04725PsbRPhotosystem II 10 kDa polypeptide PsbR
PF04745Pox_A8VITF-3 subunit protein
PF04748Polysacc_deac_2Divergent polysaccharide deacetylaseA9CHD2
PF04749PLAC8PLAC8 family
PF04755PAP_fibrillinPAP_fibrillin
PF04757Pex2_Pex12Pex2 / Pex12 amino terminal regionG2Q0E2
PF04761Phage_TregLactococcus bacteriophage putative transcription regulator
PF04776protein_MS5Protein MS5A0A193DU83
PF04795PAPA-1PAPA-1-like conserved regionG0RY01
PF04802PP4R3Phosphatase 4 regulatory subunit 3
PF04827Plant_tranPlant transposon protein
PF04829PT-VENNPre-toxin domain with VENN motif
PF04831POPDC1-3POPDC1-3
PF04839PSRP-3_Ycf65Plastid and cyanobacterial ribosomal protein (PSRP-3 / Ycf65)P82412
PF04845PurAPurA ssDNA and RNA-binding proteinQ95RR6
PF04848Pox_A22Poxvirus A22 proteinQ9J546
PF04860Phage_portalPhage portal proteinD5ATZ0
PF04868PDE6_gammaRetinal cGMP phosphodiesterase, gamma subunitP04972
PF04882Peroxin-3Peroxin-3P56589
PF04886PTPT disordered repeat
PF04916Phospholip_BPhospholipase BQ9GL30
PF04924Pox_A6Poxvirus A6 proteinP20985
PF04926PAP_RNA-bindPoly(A) polymerase predicted RNA binding domainQ10295
PF04928PAP_centralPoly(A) polymerase central domainQ10295
PF04943Pox_F11Poxvirus F11 protein
PF04947Pox_VLTF3Poxvirus Late Transcription Factor VLTF3 like
PF04951Peptidase_M55D-aminopeptidaseP26902
PF04971Phage_holin_2_1Bacteriophage P21 holin S
PF04984Phage_sheath_1Phage tail sheath protein subtilisin-like domainQ8YRW7
PF04985Phage_tubePhage tail tube protein FIIQ9I5S9
PF04987PigNPhosphatidylinositolglycan class N (PIG-N)
PF05006PIF3Per os infectivity factor 3
PF05016ParE_toxinParE toxin of type II toxin-antitoxin system, parDEA0A0U2Y7P6
PF05023PhytochelatinPhytochelatin synthaseQ8YY76
PF05028PARG_cat_CPoly (ADP-ribose) glycohydrolase (PARG), Macro domain foldQ86W56
PF05033Pre-SETPre-SET motifQ96KQ7
PF05041Pecanex_CPecanex protein (C-terminus)
PF05065Phage_capsidPhage capsid familyS5Y5B1
PF05069Phage_tail_SPhage virion morphogenesis family
PF05092PIFPer os infectivity
PF05100Phage_tail_LPhage minor tail protein L
PF05105Phage_holin_4_1Bacteriophage holin family
PF05106Phage_holin_3_1Phage holin family (Lysis protein S)
PF05115PetLCytochrome B6-F complex subunit VI (PetL)Q9M3L0
PF05125Phage_cap_P2Phage major capsid protein, P2 familyA4PE30
PF05131Pep3_Vps18Pep3/Vps18/deep orange beta-propeller domainG0S4R9
PF05135Phage_connect_1Phage gp6-like head-tail connector proteinQ38584
PF05136Phage_portal_2Phage portal protein, lambda family
PF05137PilNFimbrial assembly protein (PilN)Q306N5
PF05138PaaA_PaaCPhenylacetic acid catabolic proteinQ97YL0
PF05144Phage_CRIReplication-associated protein G2P N-terminal
PF05151PsbMPhotosystem II reaction centre M protein (PsbM)Q8DHA7
PF05185PRMT5PRMT5 arginine-N-methyltransferaseO14744
PF05193Peptidase_M16_CPeptidase M16 inactive domainA0A1S3VF71
PF05196PTN_MK_NPTN/MK heparin-binding protein family, N-terminal domainP21246
PF05233PHB_accPHB accumulation regulatory domain
PF05239PRCPRC-barrel domainP0C0Y7
PF05269Phage_CIIBacteriophage CII proteinP03042
PF05278PEARLI-4Arabidopsis phospholipase-like protein (PEARLI 4)
PF05287PMGPMG protein
PF05299Peptidase_M61M61 glycyl aminopeptidaseQ5QTY1
PF05320Pox_RNA_Pol_19Poxvirus DNA-directed RNA polymerase 19 kDa subunitQ49QC8
PF05342Peptidase_M26_NM26 IgA1-specific Metallo-endopeptidase N-terminal regionC5NYF3
PF05343Peptidase_M42M42 glutamyl aminopeptidaseO59196
PF05352Phage_connectorPhage Connector (GP10)I3PV47
PF05354Phage_attachPhage Head-Tail Attachment proteinP03714
PF05356Phage_Coat_BInovirus Coat protein BP03621
PF05357Phage_Coat_APhage Coat Protein AP03663
PF05361PP1_inhibitorPKC-activated protein phosphatase-1 inhibitorO18734
PF05367Phage_endo_IPhage endonuclease IP00641
PF05373Pro_3_hydrox_CL-proline 3-hydroxylase, C-terminalQ989T9
PF05375Pacifastin_IPacifastin inhibitor (LCMII)A0A6L2PIG6
PF05380Peptidase_A17Pao retrotransposon peptidase
PF05396Phage_T7_CapsidPhage T7 capsid assembly protein
PF05398PufQPufQ cytochrome subunit
PF05402PqqDCoenzyme PQQ synthesis protein D (PqqD)Q47QT5
PF05403Plasmodium_HRPPlasmodium histidine-rich protein (HRPII/III)
PF05416Peptidase_C37Southampton virus-type processing peptidaseA0A0K2E2J2
PF05435Phi-29_GP3Phi-29 DNA terminal protein GP3P03681
PF05445Pox_ser-thr_kinPoxvirus serine/threonine protein kinase
PF05449Phage_holin_3_7Putative 3TM holin, Phage_holin_3
PF05476PET122PET122
PF05478PromininProminin
PF05479PsaNPhotosystem I reaction centre subunit N (PSAN or PSI-N)B6TXS5
PF05480PSMbetaPhenol-soluble modulin beta proteinH9BRQ4
PF05488PAAR_motifPAAR motifQ4K3M9
PF05489Phage_tail_XPhage Tail Protein XG3XD62
PF05506PLipase_C_CBacterial phospholipase C, C-terminal domain
PF05517p25-alphap25-alphaQ9BW30
PF05521Phage_H_T_joinPhage head-tail joining proteinO48446
PF05524PEP-utilisers_NPEP-utilising enzyme, N-terminalQ8R7R4
PF05543Peptidase_C47Staphopain peptidase C47P0C1S6
PF05544Pro_racemaseProline racemaseQ96EM0
PF05547Peptidase_M6Immune inhibitor A peptidase M6, catalytic domainD8H130
PF05548Peptidase_M11Gametolysin peptidase M11
PF05569Peptidase_M56BlaR1 peptidase M56Q00419
PF05572Peptidase_M43Pregnancy-associated plasma protein-AQ13219
PF05576Peptidase_S37PS-10 peptidase S37
PF05577Peptidase_S28Serine carboxypeptidase S28A0A3F3RXI7
PF05579Peptidase_S32Equine arteritis virus serine endopeptidase S32A1E8J1
PF05580Peptidase_S55SpoIVB peptidase S55
PF05582Peptidase_U57YabG peptidase U57
PF05597PhasinPoly(hydroxyalcanoate) granule associated protein (phasin)
PF05617Prolamin_likeProlamin-like
PF05625PAXNEBPAXNEB proteinQ02884
PF05639PupPup-like proteinA0A045GWT8
PF05648PEX11Peroxisomal biogenesis factor 11 (PEX11)
PF05649Peptidase_M13_NPeptidase family M13I6X8R2
PF05708Peptidase_C92Permuted papain-like amidase enzyme, YaeF/YiiX, C92 familyQ74NK7
PF05714PFam54_60Borrelia Bbcrasp-1 domain containing proteinO50958
PF05718Pox_int_transPoxvirus intermediate transcription factor
PF05721PhyHPhytanoyl-CoA dioxygenase (PhyH)Q4WAW9
PF05726Pirin_CPirin C-terminal cupin domainA0A3N4BQ10
PF05757PsbQOxygen evolving enhancer protein 3Q9SGH4
PF05787PhoXAlkaline phosphatase PhoXQ3K5N8
PF05795Plasmodium_VirPlasmodium vivax Vir protein
PF05808PodoplaninPodoplanin
PF05824Pro-MCHPro-melanin-concentrating hormone (Pro-MCH)
PF05825PSP94Beta-microseminoprotein (PSP-94)A7VN14
PF05826Phospholip_A2_2Phospholipase A2P00630
PF05840Phage_GPABacteriophage replication gene A protein (GPA)
PF05845PhnHBacterial phosphonate metabolism protein (PhnH)P16686
PF05861PhnIBacterial phosphonate metabolism protein (PhnI)P16687
PF05870PA_decarboxPhenolic acid decarboxylase (PAD)C6F3U5
PF05874PBANPheromone biosynthesis activating neuropeptide (PBAN)
PF05894Podovirus_Gp16Podovirus DNA encapsidation protein (Gp16)P11014
PF05903Peptidase_C97PPPDE putative peptidase domainQ6ICB0
PF05926Phage_GPLPhage head completion protein (GPL)
PF05929Phage_GPOPhage capsid scaffolding protein (GPO) serine peptidase
PF05930Phage_AlpAProphage CP4-57 regulatory protein (AlpA)
PF05939Phage_min_tailPhage minor tail protein
PF05942PaREP1Archaeal PaREP1/PaREP8 familyP95883
PF05944Phage_term_smalPhage small terminase subunit
PF05951Peptidase_M15_2Bacterial protein of unknown function (DUF882)
PF05954Phage_GPDPhage tail baseplate hub (GPD)Q4K3N1
PF05969PSII_Ycf12Photosystem II complex subunit Ycf12Q8DJI1
PF05970PIF1PIF1-like helicaseD3PAZ1
PF06007PhnJPhosphonate metabolism protein PhnJP16688
PF06035Peptidase_C93Bacterial transglutaminase-like cysteine proteinase BTLCPQ3KK32
PF06069PerCPerC transcriptional activator
PF06074Portal_MuPortal protein of Mu bacteriophage
PF06099Phenol_hyd_subPhenol hydroxylase subunit
PF06114Peptidase_M78IrrE N-terminal-like domainA0A290ZVI6
PF06120Phage_HK97_TLTMTail length tape measure protein
PF06130PTACPhosphate propanoyltransferaseQ21A54
PF06141Phage_tail_UPhage minor tail protein UP03732
PF06146PsiEPhosphate-starvation-inducible E family
PF06152Phage_min_cap2Phage minor capsid protein 2
PF06162PgaPase_1Putative pyroglutamyl peptidase PgaPase_1
PF06167Peptidase_M90Glucose-regulated metallo-peptidase M90A6TB83
PF06194Phage_Orf51Phage Conserved Open Reading Frame 51
PF06199Phage_tail_2Phage tail tube proteinO48449
PF06201PITHPITH domainQ9SQZ9
PF06222Phage_TAC_1Phage tail assembly chaperoneQ9MCS5
PF06223Phage_tail_TMinor tail protein T
PF06227Poxv_Bcl-2-likePoxvirus Bcl-2-like proteinsP26672
PF06243PaaBPhenylacetic acid degradation BA6T8I1
PF06247Plasmod_Pvs28Pvs28 EGF domainQ6LEB4
PF06290PsiBPlasmid SOS inhibition protein (PsiB)P10031
PF06297PETPET Domain
PF06298PsbYPhotosystem II protein Y (PsbY)Q8DKM3
PF06321P_gingi_FimAMajor fimbrial subunit protein (FimA)B2RH54
PF06322Phage_NinHPhage NinH protein
PF06323Phage_antiter_QPhage antitermination protein Q
PF06324Pigment_DHPigment-dispersing hormone (PDH)
PF06325PrmARibosomal protein L11 methyltransferase (PrmA)Q86X55
PF06381Phage_portal_3Phage portal protein
PF06382Protamine_likeProtamine and protamine like
PF06394Pepsin-I3Pepsin inhibitor-3-like repeated domainP19400
PF06398Pex24pIntegral peroxisomal membrane peroxin
PF06404PSKPhytosulfokine precursor protein (PSK)
PF06422PDR_CDRCDR ABC transporterP33302
PF06424PRP1_NPRP1 splicing factor, N-terminalQ91YR7
PF06431Polyoma_lg_T_CPolyomavirus large T antigen C-terminusP03072
PF06466PCAF_NPCAF (P300/CBP-associated factor) N-terminal domainQ9JHD2
PF06506PrpR_NPropionate catabolism activatorQ97LU5
PF06514PsbUPhotosystem II 12 kDa extrinsic protein (PsbU)B4WMT5
PF06521PAR1PAR1 protein
PF06528Phage_P2_GpEPhage P2 GpE
PF06530Phage_antitermQPhage antitermination protein QQ9XJQ6
PF06542PHA-1Regulator protein PHA-1
PF06544Prp3_CSmall nuclear ribonucleoprotein Prp3, C-terminal domainO43395
PF06581p31cometMad1 and Cdc20-bound-Mad2 bindingQ15013
PF06590PerBPerB protein
PF06596PsbXPhotosystem II reaction centre X protein (PsbX)B4WIZ7
PF06605Prophage_tailProphage endopeptidase tailA4ZFC5
PF06607ProkineticinProkineticinQ9PW66
PF06637PV-1PV-1 protein (PLVAP)
PF06640P_CP protein C-terminus
PF06667PspBPhage shock protein B
PF06694Plant_NMP1Plant nuclear matrix protein 1 (NMP1)
PF06699PIG-FGPI biosynthesis protein family Pig-F
PF06728PIG-UGPI transamidase subunit PIG-UQ9H490
PF06732Pescadillo_NPescadillo N-terminusO60164
PF06754PhnGPhosphonate metabolism protein PhnGP16685
PF06798PrkAPrkA serine protein kinase C-terminal domain
PF06810Phage_GP20Phage minor structural protein GP20
PF06820Phage_fiber_CPutative prophage tail fibre C-terminus
PF06840PDC10_CProgrammed cell death protein 10, C-terminalQ9BUL8
PF06841Phage_T4_gp19T4-like virus tail tube protein gp19Q8YRW8
PF06850PHB_depo_CPHB de-polymerase C-terminus
PF06854Phage_Gp15Bacteriophage Gp15 protein
PF06864PAP_PilOPilin accessory protein (PilO)Q63JW5
PF06865PpnpPyrimidine/purine nucleoside phosphorylaseQ9I3E3
PF06875PRFPlethodontid receptivity factor PRF
PF06888Put_PhosphatasePutative Phosphatase
PF06890Phage_Mu_Gp45Bacteriophage Mu Gp45, N-terminal
PF06891P2_Phage_GpRP2 phage tail completion protein R (GpR)
PF06892Phage_CP76Phage regulatory protein CII (CP76)P21678
PF06894Phage_TAC_2Bacteriophage lambda tail assembly chaperone, TAC, protein G
PF06896Phage_TAC_3Phage tail assembly chaperone proteins, TAC
PF06917Pectate_lyase_2Periplasmic pectate lyaseQ7MCK3
PF06946Phage_holin_5_1Bacteriophage A118-like holin, Hol118
PF06951PLA2G12Group XII secretory phospholipase A2 precursor (PLA2G12)
PF06952PsiAPsiA protein
PF06958Pyocin_SS-type PyocinP17998
PF06971Put_DNA-bind_NPutative DNA-binding protein N-terminusQ9WY16
PF06978POP1_NRibonucleases P/MRP protein subunit POP1, N-terminalP41812
PF06992Phage_lambda_PReplication protein PP03689
PF06995Phage_P2_GpUPhage P2 GpUG3XD65
PF07017PagPAntimicrobial peptide resistance and lipid A acylation protein PagPP37001
PF07022Phage_CI_reprBacteriophage CI repressor helix-turn-helix domainP08707
PF07030Phage_Mu_Gp36Bacteriophage Mu, Gp36Q9T1V9
PF07054Pericardin_rptPericardin like repeat
PF07108PipAPipA proteinA0A0F6AZI6
PF07123PsbWPhotosystem II reaction centre W protein (PsbW)A0A7S3QU88
PF07141Phage_term_smaPutative bacteriophage terminase small subunit
PF07145PAM2Ataxin-2 C-terminal regionQ9H074
PF07147PDCD9Mitochondrial 28S ribosomal protein S30 (PDCD9)Q9NP92
PF07149Pes-10Pes-10
PF07156Prenylcys_lyasePrenylcysteine lyase
PF07163Pex26Pex26 protein
PF07167PhaC_NPoly-beta-hydroxybutyrate polymerase (PhaC) N-terminusE1APK1
PF07194P2P2 response regulator binding domainQ56310
PF07222PBP_sp32Proacrosin binding protein sp32
PF07227PHD_OberonPHD - plant homeodomain finger protein
PF07230Portal_T4Bacteriophage T4-like portal protein (Gp20)P13334
PF07238PilZPilZ domainQ8PND9
PF07243Phlebovirus_G1Phlebovirus glycoprotein G1P03518
PF07244POTRASurface antigen variable number repeatP0A940
PF07245Phlebovirus_G2Phlebovirus glycoprotein G2 fusion domainA0A016UZK2
PF07259ProSAASProSAAS precursor
PF07276PSGPApopolysialoglycoprotein (PSGP)
PF07310PAS_5PAS domain
PF07317PilZNFlagellar regulator YcgR, PilZN domainP76010
PF07332Phage_holin_3_6Putative Actinobacterial Holin-X, holin superfamily III
PF07352Phage_Mu_GamBacteriophage Mu Gam like proteinQ72CZ5
PF07376ProsysteminProsystemin
PF07390P30Mycoplasma P30 protein
PF07392P19Arf_NCyclin-dependent kinase inhibitor 2a p19Arf N-terminusQ64364
PF07396Porin_O_PPhosphate-selective porin O and PP32977
PF07410Phage_Gp111Streptococcus thermophilus bacteriophage Gp111 protein
PF07418PCEMA1Acidic phosphoprotein precursor PCEMA1
PF07419PilMPilMQ6X3P5
PF07421Pro-NT_NNNeurotensin/neuromedin N precursor
PF07430PP1Phloem filament protein PP1 cystatin-like domain
PF07445PriCPrimosomal replication protein priCP23862
PF07455PsuPhage polarity suppression protein (Psu)P05460
PF07465PsaMPhotosystem I protein M (PsaM)W0S1Z9
PF07471Phage_Nu1Phage DNA packaging protein Nu1Q8ZMZ2
PF07472PA-IILFucose-binding lectin II (PA-IIL)Q9HYN5
PF07491PPI_Ypi1Protein phosphatase inhibitorO60927
PF07526POXAssociated with HOX
PF07530PRE_C2HCAssociated with zinc fingers
PF07543PGA2Protein trafficking PGA2
PF07580Peptidase_M26_CM26 IgA1-specific Metallo-endopeptidase C-terminal regionC5NYF3
PF07583PSCyt2Protein of unknown function (DUF1549)
PF07587PSD1Protein of unknown function (DUF1553)
PF07589PEP-CTERMPEP-CTERM motif
PF07591PT-HINTPretoxin HINT domainA3DH25
PF07595Planc_extracelPlanctomycete extracellular
PF07624PSD2Protein of unknown function (DUF1585)
PF07626PSD3Protein of unknown function (DUF1587)
PF07627PSCyt3Protein of unknown function (DUF1588)
PF07631PSD4Protein of unknown function (DUF1592)
PF07635PSCyt1Planctomycete cytochrome C
PF07637PSD5Protein of unknown function (DUF1595)
PF07676PD40WD40-like Beta Propeller RepeatP0A855
PF07691PA14PA14 domainC9ZDY4
PF07704PSK_trans_facRv0623-like transcription factorP9WJ35
PF07710P53_tetramerP53 tetramerisation motifP04637
PF07714PK_Tyr_Ser-ThrProtein tyrosine and serine/threonine kinaseP00519
PF07715PlugTonB-dependent Receptor Plug DomainP06971
PF07722Peptidase_C26Peptidase C26Q9I6J4
PF07768PVL_ORF50PVL ORF-50-like family
PF07769PsiF_repeatpsiF repeat
PF07775PaRep2bPaRep2b protein
PF07788PDDEXK_10PD-(D/E)XK nuclease superfamily
PF07790Pilin_NArchaeal Type IV pilin, N-terminal
PF07819PGAP1PGAP1-like alpha/beta domain
PF07828PA-ILPA-IL-like proteinQ05097
PF07830PP2C_CProtein serine/threonine phosphatase 2C, C-terminal domainP35813
PF07831PYNP_CPyrimidine nucleoside phosphorylase C-terminal domainP39142
PF07847PCO_ADOPCO_ADOQ96SZ5
PF07848PaaXPaaX-like proteinQ28UN6
PF07879PHB_acc_NPHB/PHA accumulation regulator DNA-binding domain
PF07903PaRep2aPaRep2a protein
PF07905PucRPurine catabolism regulatory protein-like family
PF07910Peptidase_C78Peptidase family C78D6WWN1
PF07915PRKCSHGlucosidase II beta subunit-like proteinO08795
PF07929PRiA4_ORF3Plasmid pRiA4b ORF-3-like proteinQ8PRU3
PF07943PBP5_CPenicillin-binding protein 5, C-terminal domainQ5NG28
PF07976Phe_hydrox_dimPhenol hydroxylase, C-terminal dimerisation domainQ6SSJ6
PF07981Plasmod_MYXSPDYPlasmodium repeat_MYXSPDY
PF07992Pyr_redox_2Pyridine nucleotide-disulphide oxidoreductaseQ28943
PF07998Peptidase_M54Peptidase family M54O29917
PF08005PHRPHR domainQ9BX70
PF08010Phage_30_3Bacteriophage protein GP30.3
PF08011PDDEXK_9PD-(D/E)XK nuclease superfamily
PF08015PheromoneFungal mating-type pheromone
PF08016PKD_channelPolycystin cation channelQ99J21
PF08041PetMPetM family of cytochrome b6f complex subunit 7A0A0K9RMM1
PF08042PqqAPqqA family
PF08052PyrBI_leaderPyrBI operon leader peptide
PF08061P68HRP68HR (NUC004) repeat
PF08066PMC2NTPMC2NT (NUC016) domainQ01780
PF08078PsaXPsaX familyP58566
PF08082PRO8NTPRO8NT (NUC069), PrP8 N-terminal domainQ6P2Q9
PF08083PROCNPROCN (NUC071) domainQ6P2Q9
PF08084PROCTPROCT (NUC072) domainQ6P2Q9
PF08114PMP1_2ATPase proteolipid family
PF08126Propeptide_C25Propeptide_C25Q51817
PF08127Propeptide_C1Peptidase family C1 propeptideQ8MNY2
PF08166PELP1_HEATPELP1, middle domainC9JFV4
PF08170POPLDPOPLD (NUC188) domainP41812
PF08182PedibinPedibin/Hym-346 family
PF08190PIH1PIH1 N-terminal domainQ9NWS0
PF08192Peptidase_S64Peptidase family S64
PF08223PaaX_CPaaX-like protein C-terminal domainO53782
PF08237PE-PPEPE-PPE domain
PF08259PeriviscerokinPeriviscerokinin family
PF08270PRD_MgaM protein trans-acting positive regulator (MGA) PRD domainQ97P44
PF08276PAN_2PAN-like domainQ39276
PF08277PAN_3PAN-like domain
PF08288PIGAPIGA (GPI anchor biosynthesis)
PF08291Peptidase_M15_3Peptidase M15P00733
PF08308PEGAPEGA domain
PF08316Pal1Pal1 cell morphology protein
PF08320PIG-XPIG-X / PBN1
PF08321PPP5PPP5 TPR repeat regionP53041
PF08324PULPUL domainP36037
PF08336P4Ha_NProlyl 4-Hydroxylase alpha-subunit, N-terminal regionP13674
PF08337Plexin_cytoplPlexin cytoplasmic RasGAP domainO60486
PF08348PAS_6YheO-like PAS domain
PF08369PCP_redProto-chlorophyllide reductase 57 kD subunitP26163
PF08370PDR_assocPlant PDR ABC transporter associated
PF08372PRT_CPlant phosphoribosyltransferase C-terminal
PF08374ProtocadherinProtocadherin
PF08398Phospholip_A2_4Phospholipase A2-like domainQ6JC40
PF08400phage_tail_NProphage tail fibre N-terminal
PF08416PTBPhosphotyrosine-binding domainQ63HR2
PF08417PaOPheophorbide a oxygenase
PF08418Pol_alpha_B_NDNA polymerase alpha subunit B N-terminalQ14181
PF08429PLU-1PLU-1-like protein
PF08439Peptidase_M3_NOligopeptidase FQ5L5N2
PF08446PAS_2PAS foldQ9RZA4
PF08447PAS_3PAS foldP30561
PF08448PAS_4PAS foldA0A0H2XCS3
PF08453Peptidase_M9_NPeptidase family M9 N-terminalF7IZI6
PF08458PH_2Plant pleckstrin homology-like region
PF08478POTRA_1POTRA domain, FtsQ-typeP06136
PF08479POTRA_2POTRA domain, ShlB-typeQ3YL97
PF08485Polysacc_syn_2CPolysaccharide biosynthesis protein C-terminalA0A0H3JPH0
PF08496Peptidase_S49_NPeptidase family S49 N-terminal
PF08499PDEase_I_N3'5'-cyclic nucleotide phosphodiesterase N-terminal
PF08510PIG-PPIG-P
PF08526PAD_NProtein-arginine deiminase (PAD) N-terminal domainQ9ULW8
PF08527PAD_MProtein-arginine deiminase (PAD) middle domainQ9ULW8
PF08530PepX_CX-Pro dipeptidyl-peptidase C-terminal non-catalytic domainQ9L9D7
PF08543Phos_pyr_kinPhosphomethylpyrimidine kinaseQ8K183
PF08548Peptidase_M10_CPeptidase M10 serralysin C terminalD0VMS8
PF08563P53_TADP53 transactivation motifP04637
PF08566Pam17Mitochondrial import protein Pam17
PF08567PH_TFIIHTFIIH p62 subunit, N-terminal domainP32780
PF08572PRP3pre-mRNA processing factor 3 domainO43395
PF08577PI31_Prot_CPI31 proteasome regulator
PF08601PAP1Transcription factor PAP1
PF08606Prp19Prp19/Pso4-likeQ9UMS4
PF08610Pex16Peroxisomal membrane protein (Pex16)
PF08629PDE8PDE8 phosphodiesterase
PF08634Pet127Mitochondrial protein Pet127
PF08636Pkr1ER protein Pkr1
PF08645PNK3PPolynucleotide kinase 3 phosphataseQ9JLV6
PF08665PglZPglZ domainQ7MVV4
PF08686PLACPLAC (protease and lacunin) domain
PF08692Pet20Mitochondrial protein Pet20
PF08703PLC-beta_CPLC-beta C terminalQ01970
PF08707PriCT_2Primase C terminal 2 (PriCT-2)
PF08708PriCT_1Primase C terminal 1 (PriCT-1)Q06B24
PF08733PalHPalH/RIM21
PF08745PIN_5PINc domain ribonucleaseA1WZ95
PF08748Phage_TAC_4Phage tail assembly chaperone
PF08775ParBParB familyP0A247
PF08789PBCV_basic_adapPBCV-specific basic adaptor domain
PF08799PRP4pre-mRNA processing factor 4 (PRP4) likeO43172
PF08805PilSPilS N terminalQ8Z1L1
PF08813Phage_tail_3Phage tail tube protein, TTP
PF08823PG_binding_2Putative peptidoglycan binding domain
PF08857ParBc_2Putative ParB-like nucleaseA9CIY5
PF08873Phage_Mu_Gp37Bacteriophage Mu, Gp37
PF08890Phage_TAC_5Phage XkdN-like tail assembly chaperone protein, TACP45930
PF08916Phe_ZIPPhenylalanine zipperO14492
PF08918PhoQ_SensorPhoQ SensorP23837
PF08928PoNi_NPoNe immunity protein (PoNi), N-terminal
PF08929PoNi_CPoNe immunity proteins (PoNi), C-terminalQ9I1R6
PF08933PrnBMonodechloroaminopyrrolnitrin synthase PrnBP95481
PF08944p47_phox_CNADPH oxidase subunit p47Phox, C terminal domainP14598
PF09016Pas_SaposinPas factor saposin foldQ56GA4
PF09029Preseq_ALAS5-aminolevulinate synthase presequence
PF09056Phospholip_A2_3Prokaryotic phospholipase A2Q9P4F6
PF09070PFUPFU (PLAA family ubiquitin binding)P36037
PF09077Phage-MuB_CMu B transposition protein, C terminalP03763
PF09168PepX_NX-Prolyl dipeptidyl aminopeptidase PepX, N-terminalQ59485
PF09180ProRS-C_1Prolyl-tRNA synthetase, C-terminalA0A7J6JUK2
PF09181ProRS-C_2Prolyl-tRNA synthetase, C-terminalQ58635
PF09182PuR_NBacterial purine repressor, N-terminalP37551
PF09184PPP4R2PPP4R2
PF09216Pfg27Pfg27Q8IEU2
PF09228Prok-TraMProkaryotic Transcriptional repressor TraMP55408
PF09246PHATPHATQ23972
PF09250Prim-PolBifunctional DNA primase/polymerase, N-terminalQ54324
PF09251PhageP22-tailSalmonella phage P22 tail-spikeP12528
PF09262PEX-1NPeroxisome biogenesis factor 1, N-terminalQ5BL07
PF09263PEX-2NPeroxisome biogenesis factor 1, N-terminalQ5BL07
PF09274ParGParGQ9KJ82
PF09275Pertus-S4-toxPertussis toxin S4 subunitP0A3R5
PF09276Pertus-S5-toxPertussis toxin S5 subunitP04981
PF09286Pro-kuma_activPro-kumamolisin, activation domainO14773
PF09306Phage-scaffoldBacteriophage, scaffolding proteinP26748
PF09310PD-C2-AF1POU domain, class 2, associating factor 1
PF09327Phage_Tail_TipBacteriophage tail tip fiber protein
PF09328Phytochelatin_CDomain of unknown function (DUF1984)
PF09341Pcc1Transcription factor Pcc1Q9V1Z9
PF09355Phage_Gp19Phage protein Gp19/Gp15/Gp42
PF09356Phage_BR0599Phage conserved hypothetical protein BR0599A0A9U0
PF09361Phasin_2Phasin proteinO32470
PF09370PEP_hydrolasePhosphoenolpyruvate hydrolase-likeQ981G2
PF09372PRANCPRANC domain
PF09373PMBRPseudomurein-binding repeat
PF09374PG_binding_3Predicted Peptidoglycan domainQ57DE3
PF09375Peptidase_M75ImelysinQ4ZR20
PF09381Porin_OmpGOuter membrane protein G (OmpG)P76045
PF09386ParDAntitoxin ParDP22995
PF09409PUBPUB domainQ96EP0
PF09411PagLLipid A 3-O-deacylase (PagL)Q9HVD1
PF09419PGP_phosphataseMitochondrial PGP phosphatase
PF09423PhoDPhoD-like phosphataseP42251
PF09437Pombe_5TMPombe specific 5TM protein
PF09461PcFPhytotoxin PcF proteinQ94FS7
PF09471Peptidase_M64IgA Peptidase M64Q5L9L3
PF09476Pilus_CpaDPilus biogenesis CpaD protein (pilus_cpaD)
PF09480PrgHType III secretion system protein PrgH-EprH (PrgH)P0A221
PF09492Pec_lyasePectic acid lyaseQ9X592
PF09524Phg_2220_CConserved phage C-terminus (Phg_2220_C)
PF09550Phage_TAC_6Phage tail assembly chaperone protein, TAC
PF09583Phageshock_PspGPhage shock protein G (Phageshock_PspG)
PF09584Phageshock_PspDPhage shock protein PspD (Phageshock_PspD)
PF09587PGA_capBacterial capsule synthesis protein PGA_cap
PF09602PhaP_BmegPolyhydroxyalkanoic acid inclusion protein (PhaP_Bmeg)
PF09604Potass_KdpFF subunit of K+-transporting ATPase (Potass_KdpF)P36937
PF09627PrgUPrgU-like proteinQ8KUD5
PF09638Ph1570Ph1570 proteinO59278
PF09650PHA_gran_rgnPutative polyhydroxyalkanoic acid system protein (PHA_gran_rgn)
PF09656PGPGWPutative transmembrane protein (PGPGW)
PF09662Phenyl_P_gammaPhenylphosphate carboxylase gamma subunit (Phenyl_P_gamma)
PF09669Phage_pRhaPhage regulatory protein Rha (Phage_pRha)
PF09681Phage_rep_org_NN-terminal phage replisome organiser (Phage_rep_org_N)
PF09682Phage_holin_6_1Bacteriophage holin of superfamily 6 (Holin_LLH)
PF09686Plasmid_RAQPRDPlasmid protein of unknown function (Plasmid_RAQPRD)
PF09687PRESANPlasmodium RESA N-terminalA0A143ZZR8
PF09689PY_rept_46Plasmodium yoelii repeat (PY_rept_46)
PF09690PYST-C1Plasmodium yoelii subtelomeric region (PYST-C1)
PF09693Phage_XkdXPhage uncharacterised protein (Phage_XkdX)
PF09697Porph_gingProtein of unknown function (Porph_ging)
PF09699Paired_CXXCH_1Doubled CXXCH motif (Paired_CXXCH_1)Q74FJ0
PF09712PHA_synth_III_EPoly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E)
PF09715Plasmod_dom_1Plasmodium protein of unknown function (Plasmod_dom_1)
PF09754PAC2PAC2 familyP36040
PF09768Peptidase_M76Peptidase M76 family
PF09770PAT1Topoisomerase II-associated protein PAT1P25644
PF09785Prp31_CPrp31 C terminal domainQ8WWY3
PF09803Pet100Pet100
PF09931Phage_phiJL001_Gp84_NBacteriophage phiJL001, Gp84, N-terminalA0A9U0
PF09956Phage_cement_2Phage cement protein
PF10021PARG_cat_microbMicrobial-type PARG, catalytic domainQ9RZM4
PF10032Pho88Phosphate transport (Pho88)
PF10076Phage_Mu_Gp48Bacteriophage Mu-like, Gp48
PF10109Phage_TAC_7Phage tail assembly chaperone proteins, E, or 41 or 14
PF10114PocRSensory domain found in PocR
PF10130PIN_2PIN domain
PF10131PTPS_related6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein
PF10142PhoPQ_relatedPhoPQ-activated pathogenicity-related protein
PF10143PhosphMutase2,3-bisphosphoglycerate-independent phosphoglycerate mutaseQ9HL27
PF10145PhageMin_TailPhage-related minor tail protein
PF10178PAC3Proteasome assembly chaperone 3Q9BT73
PF10181PIG-HGPI-GlcNAc transferase complex, PIG-H component
PF10195Phospho_p8DNA-binding nuclear phosphoprotein p8
PF10203Pet191_NCytochrome c oxidase assembly protein PET191
PF10212PPP1R21_helicalProtein phosphatase 1 regulatory subunit 21, six-helix bundleQ6ZMI0
PF10251PEN-2Presenilin enhancer-2 subunit of gamma secretaseQ9NZ42
PF10252PP28Casein kinase substrate phosphoprotein PP28
PF10253PRCCMitotic checkpoint regulator, MAD2B-interacting
PF10254Pacs-1PACS-1 cytosolic sorting protein
PF10255Paf67RNA polymerase I-associated factor PAF67Q9Y262
PF10258PHAX_RNA-bdPhosphorylated adapter RNA export protein, RNA-binding domainQ9H814
PF10274ParcGParkin co-regulated proteinQ96M98
PF10275Peptidase_C65Peptidase C65 OtubainB9G207
PF10333Pga1GPI-Mannosyltransferase II co-activator
PF10409PTEN_C2C2 domain of PTEN tumour-suppressor proteinP60484
PF10448POC3_POC420S proteasome chaperone assembly proteins 3 and 4Q07951
PF10450POC1POC1 chaperoneQ05778
PF10459Peptidase_S46Peptidase S46B2RID1
PF10460Peptidase_M30Peptidase M30A0A292DHH8
PF10461Peptidase_S68Peptidase S68
PF10462Peptidase_M66Peptidase M66O82882
PF10463Peptidase_U49Peptidase U49
PF10486PI3K_1B_p101Phosphoinositide 3-kinase gamma adapter protein p101 subunitO02696
PF10488PP1c_bdgPhosphatase-1 catalytic subunit binding regionO75807
PF10495PACT_coil_coilPericentrin-AKAP-450 domain of centrosomal targeting protein
PF10502Peptidase_S26Signal peptidase, peptidase S26P00803
PF10508Proteasom_PSMBProteasome non-ATPase 26S subunit
PF10510PIG-SPhosphatidylinositol-glycan biosynthesis class S proteinQ96S52
PF10532Plant_all_betaPlant specific N-all beta domain
PF10533Plant_zn_clustPlant zinc cluster domain
PF10536PMDPlant mobile domain
PF10546P63CP63C domain
PF10547P22_AR_NP22_AR N-terminal domain
PF10548P22_AR_CP22AR C-terminal domain
PF10554Phage_ASHAsh protein family
PF10559Plug_transloconPlug domain of Sec61pP61619
PF10584Proteasome_A_NProteasome subunit A N-terminal signatureP60900
PF10590PNP_phzG_CPyridoxine 5'-phosphate oxidase C-terminal dimerisation regionP0AFI7
PF10600PDZ_assocPDZ-associated domain of NMDA receptorsP31016
PF10604Polyketide_cyc2Polyketide cyclase / dehydrase and lipid transportA0A3Q7HTY9
PF10609ParANUBPL iron-transfer P-loop NTPaseG3XD64
PF10623PilIPlasmid conjugative transfer protein PilI
PF10653Phage-A118_gp45Protein gp45 of Bacteriophage A118
PF10662PduV-EutPEthanolamine utilisation - propanediol utilisation
PF10666Phage_TAC_8Phage tail assembly chaperone protein Gp14 ()A118
PF10668Phage_terminasePhage terminase small subunit
PF10669Phage_Gp23Protein gp23 (Bacteriophage A118)
PF10743Phage_CoxRegulatory phage protein coxP07695
PF10746Phage_holin_2_2Phage holin T7 family, holin superfamily II
PF10765Phage_P22_NinXBacteriophage P22, NinXB4EGA9
PF10772Phage_HP1_Orf24Bacteriophage HP1, Orf24
PF10784Plasmid_stab_BPlasmid stability protein
PF10876Phage_TAC_9Phage tail assembly chaperone protein, TAC
PF10893Phage_186_FilBacteriophage 186, Fil
PF10910Phage_gene29Phage gene 29 protein family
PF10963Phage_TAC_10Phage tail assembly chaperone
PF11031Phage_holin_TBacteriophage T holinP06808
PF11087PRD1_DDPRD1 phage membrane DNA delivery
PF11090Phage_T7_Gp13Bacteriophage T7, probable scaffold protein Gp13
PF11104PilM_2Type IV pilus assembly protein PilM;G3XD28
PF11110Phage_hub_GP28Baseplate hub distal subunit
PF11112PyocinActivatorPyocin activator protein PrtN
PF11124Pho86Inorganic phosphate transporter chaperone Pho86
PF11131PhrC_PhrFRap-phr extracellular signalling
PF11133Phage_head_fibrHead fiber proteinB3VMP4
PF11134Phage_stabilisePhage stabilisation proteinQ716G7
PF11183PmrDPolymyxin resistance protein PmrDP37590
PF11246Phage_gp53Base plate wedge protein 53P16011
PF11271PorAPorin PorAA0QP93
PF11326PANTS-likeSynaptic plasticity regulator PANTS-like
PF11389Porin_OmpL1Leptospira porin protein OmpL1
PF11396PepSY_likePutative beta-lactamase-inhibitor-like, PepSY-likeA7VAB9
PF11468PTase_Orf2Aromatic prenyltransferase Orf2Q4R2T2
PF11477PM0188Sialyltransferase PMO188K9UUI6
PF11522Pik1Yeast phosphatidylinositol-4-OH kinase Pik1P39104
PF11526Pfc11_Clp1_IDPcf11, Clp1-interaction domainP39081
PF11530Pilin_PilXMinor type IV pilin, PilX
PF11563ProtoglobinProtoglobinQ9YFF4
PF11565PorBAlpha helical Porin BQ8NRS3
PF11566PI31_Prot_NPI31 proteasome regulator N-terminalQ92530
PF11567PfUIS3Plasmodium falciparum UIS3 membrane proteinQ8IEU1
PF11587Prion_bPrPpMajor prion protein bPrPp - N terminalP04925
PF11619P53_CTranscription factor P53 - C terminal domainQ8IH92
PF11645PDDEXK_5PD-(D/E)XK endonucleaseQ57253
PF11650P22_Tail-4P22 tail accessory factorQ716G8
PF11651P22_CoatProteinP22 coat protein - gene protein 5P26747
PF11713Peptidase_C80Peptidase C80 familyQ9EXR0
PF11751PorP_SprFType IX secretion system membrane protein PorP/SprF
PF11808PhoRPhosphate regulon sensor protein PhoR
PF11836Phage_TAC_11Phage tail tube protein, GTA-gp10
PF11852Pullul_strch_CAlpha-1,6-glucosidases, pullulanase-type, C-terminalW9BQ28
PF11892PpnN_CPyrimidine/purine nucleotide monophosphate nucleosidase, C-terminalP0ADR8
PF11895Peroxidase_extFungal peroxidase extension regionP06181
PF11903ParD_likeParD-like antitoxin of type II bacterial toxin-antitoxin system
PF11918Peptidase_S41_NN-terminal domain of Peptidase_S41 in eukaryotic IRBPP12661
PF11919PSME4_CProteasome activator complex subunit 4-like, C-terminalQ14997
PF11955PORRPlant organelle RNA recognition domain
PF11962Peptidase_G2Peptidase_G2, IMC autoproteolytic cleavage domainQ84443
PF11985Phage_Mu_Gp27Bacteriophage Mu, Gp27
PF12025Phage_CPhage protein C
PF12053Par3_HAL_N_termN-terminal of Par3 and HAL proteinsQ9Z340
PF12058PipXPII-interacting protein XQ8YZH5
PF12068PH_RBDRab-binding domain (RBD)Q8BPQ7
PF12111PNPase_CPolyribonucleotide phosphorylase C terminalP21513
PF12114Period_CPeriod protein 2/3C-terminal regionO15055
PF12126PML_CCPML-like, coiled-coil
PF12129PHTF1-2_NHomeodomain containing protein PHTF1/2, N-terminal
PF12134PRP8_domainIVPRP8 domain IV coreQ6P2Q9
PF12135Plasmo_repPlasmodium repeat family
PF12142PPO1_DWLPolyphenol oxidase middle domainQ08303
PF12143PPO1_KFDVChloroplastic Polyphenol Oxidase C-terminal domainQ08303
PF12166Piezo_capPiezo non-specific cation channel, cap domainE2JF22
PF12177Proho_convertProhormone convertase enzymeP63239
PF12212PAZ_2PAZ domainD0VWU1
PF12222PNGaseAPeptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A
PF12229PG_binding_4Putative peptidoglycan binding domainQ3Y185
PF12230PRP21_like_PPre-mRNA splicing factor PRP21 like proteinQ15459
PF12237PCIF1_WWPhosphorylated CTD interacting factor 1 WW domainA0A0R4IKJ1
PF12260PIP49_CProtein-kinase domain of FAM69
PF12283Protein_KBacteriophage protein K
PF12306PixAInclusion body proteinQ2SVW5
PF12357PLD_CPhospholipase D C terminalQ38882
PF12360Pax7Paired box protein 7
PF12363Phage_TAC_12Phage tail assembly chaperone protein, TAC
PF12367PFO_beta_CPyruvate ferredoxin oxidoreductase beta subunit C terminalA0L8G5
PF12378P1_NMycoplasma adhesin P1, N-terminalP11311
PF12382Peptidase_A2_2Retrotransposon peptidase
PF12384Peptidase_A2BTy3 transposon peptidaseQ99315
PF12385Peptidase_C70Papain-like cysteine protease AvrRpt2A0A2U7NR52
PF12386Peptidase_C71Pseudomurein endo-isopeptidase Pei
PF12388Peptidase_M57Dual-action HEIGH metallo-peptidase
PF12389Peptidase_M73Camelysin metallo-endopeptidaseP54507
PF12391PCDO_beta_NProtocatechuate 3,4-dioxygenase beta subunit N terminalP00437
PF12403Pax2_CPaired-box protein 2 C terminal
PF12409P5-ATPaseP5-type ATPase cation transporterQ9NQ11
PF12453PTP_NProtein tyrosine phosphatase N terminal
PF12465Pr_beta_CProteasome beta subunits C terminalQ99436
PF12474PKKPolo kinase kinase
PF12484PPE-SVPPPE-SVP subfamily C-terminal region
PF12534Pannexin_likePannexin-like TM region of LRRC8Q80WG5
PF12551PHBC_NPoly-beta-hydroxybutyrate polymerase N terminal
PF12568PanZAcetyltransferase (GNAT) domain, PanZP37613
PF12571Phage_tail_fibPhage tail-collar fibre protein, N-terminal
PF12577PPARgamma_NPPAR gamma N-terminal region
PF12588PSDCPhophatidylserine decarboxylase
PF12618PHF20_AT-hookPHD finger protein 20, AT-hook
PF12621PHM7_extExtracellular tail, of 10TM putative phosphate transporter
PF12626PolyA_pol_arg_CPolymerase A arginine-rich C-terminus
PF12627PolyA_pol_RNAbdProbable RNA and SrmB- binding site of polymerase AA0A1C7DQ98
PF12666PrgIPrgI family protein
PF12691Phage_tail_terminator_6Bacteriophage tail terminator protein
PF12699phiKZ_IPphiKZ-like phage internal head proteins
PF12703ptaRNA1_toxinToxin of toxin-antitoxin type 1 system
PF12705PDDEXK_1PD-(D/E)XK nuclease superfamilyA0A024LB08
PF12708Pect-lyase_RHGA_epimRhamnogalacturonase A/epimerase, pectate lyase-likeQ716G1
PF12727PBP_likePBP superfamily domainD5SW38
PF12738PTCB-BRCTtwin BRCT domainQ9H8V3
PF12740PETasePET hydrolase-likeE9LVH9
PF12766Pyridox_oxase_2Pyridoxamine 5'-phosphate oxidaseQ28VU1
PF12769PNTB_4TM4TM region of pyridine nucleotide transhydrogenase, mitochW5PFI3
PF12778PXPVPXPV repeat (3 copies)
PF12784PDDEXK_2PD-(D/E)XK nuclease family transposase
PF12789PTRPhage tail repeat like
PF12812PDZ_1PDZ-like domain
PF12827Peroxin-22Peroxisomal biogenesis protein familyA2T0X6
PF12828PXBPX-associated
PF12834Phage_int_SAM_2Phage integrase, N-terminal
PF12849PBP_like_2PBP superfamily domainQ58MA7
PF12854PPR_1PPR repeatB8Y6I0
PF12860PAS_7PAS fold
PF12871PRP38_assocPre-mRNA-splicing factor 38-associated hydrophilic C-termQ8NAV1
PF12900Pyridox_ox_2Pyridoxamine 5'-phosphate oxidaseC1DK98
PF12910PHD_likeAntitoxin of toxin-antitoxin, RelE / RelB, TA systemQ0AZ30
PF12945PilZNRFlagellar protein YcgRP38491
PF12951PATRPassenger-associated-transport-repeatP09489
PF12974Phosphonate-bdABC transporter, phosphonate, periplasmic substrate-binding proteinA0A7G8IVX7
PF12999PRKCSH-likeGlucosidase II beta subunit-likeP14314
PF13010pRN1_helicalPrimase helical domainQ54324
PF13015PRKCSH_1Glucosidase II beta subunit-like proteinP14314
PF13041PPR_2PPR repeat familyQ96EY7
PF13089PP_kinase_NPolyphosphate kinase N-terminal domainQ7MTR1
PF13090PP_kinase_CPolyphosphate kinase C-terminal domain 2Q7MTR1
PF13091PLDc_2PLD-like domainA0A137SLD1
PF13102Phage_int_SAM_5Phage integrase SAM-like domainQ5LD33
PF13111pPIWI_RE_XpPIWI_RE module N-terminal domain
PF13180PDZ_2PDZ domainO06291
PF13188PAS_8PAS domainA0A655ZU80
PF13190PDGLEPDGLE domain
PF13201PCMDPutative carbohydrate metabolism domainA7LQL7
PF13231PMT_2Dolichyl-phosphate-mannose-protein mannosyltransferaseQ1LDT6
PF13263PHP_CPHP-associatedI6QY72
PF13303PTS_EIIC_2Phosphotransferase system, EIIC
PF13326PSII_Pbs27Photosystem II Pbs27Q8DG60
PF13360PQQ_2PQQ-like domainP77774
PF13366PDDEXK_3PD-(D/E)XK nuclease superfamily
PF13367PrsW-proteasePrsW family intramembrane metalloprotease
PF13377Peripla_BP_3Periplasmic binding protein-like domainB8I1W6
PF13396PLDc_NPhospholipase_D-nuclease N-terminal
PF13398Peptidase_M50BPeptidase M50B-like
PF13402Peptidase_M60Peptidase M60, enhancin and enhancin-likeB2UPI7
PF13407Peripla_BP_4Periplasmic binding protein domainA3DI69
PF13426PAS_9PAS domainQ63472
PF13433Peripla_BP_5Periplasmic binding protein domainQ7U3J0
PF13440Polysacc_synt_3Polysaccharide biosynthesis protein
PF13449Phytase-likeEsterase-like activity of phytase
PF13458Peripla_BP_6Periplasmic binding proteinA0A0H3ATZ3
PF13470PIN_3PIN domain
PF13485Peptidase_MA_2Peptidase MA superfamily
PF13495Phage_int_SAM_4Phage integrase, N-terminal SAM-like domainQ9HIM5
PF13529Peptidase_C39_2Peptidase_C39 like familyQ81VC3
PF13539Peptidase_M15_4D-alanyl-D-alanine carboxypeptidaseH9NAL3
PF13550Phage-tail_3Putative phage tail proteinA0A9S9
PF13554Phage_tail_terminator_5Phage tail terminator proteinA0A0H3LPN7
PF13557Phenol_MetA_degPutative MetA-pathway of phenol degradationA5W3Z9
PF13570PQQ_3PQQ-like domainB7J3C9
PF13576Pentapeptide_3Pentapeptide repeats (9 copies)
PF13596PAS_10PAS domainQ8U2Y3
PF13599Pentapeptide_4Pentapeptide repeats (9 copies)O53087
PF13609Porin_4Gram-negative porinP39767
PF13638PIN_4PIN domainQ08162
PF13670PepSY_2Peptidase propeptide and YPEB domain
PF13672PP2C_2Protein phosphatase 2CQ9I757
PF13675PilJType IV pili methyl-accepting chemotaxis transducer N-termP42257
PF13678Peptidase_M85NFkB-p65-degrading zinc proteaseQ6RYA8
PF13681PilXType IV pilus assembly protein PilX C-term
PF13714PEP_mutasePhosphoenolpyruvate phosphomutaseQ9I5E2
PF13738Pyr_redox_3Pyridine nucleotide-disulphide oxidoreductaseA0A290WZ30
PF13739PdaCDeacetylase PdaCO05403
PF13758Prefoldin_3Prefoldin subunit
PF13765PRYSPRY-associated domainQ9C029
PF13793Pribosyltran_NN-terminal domain of ribose phosphate pyrophosphokinaseP60891
PF13797Post_transc_regPost-transcriptional regulator
PF13798PCYCGCProtein of unknown function with PCYCGC motif
PF13805Pil1Eisosome component PIL1Q12230
PF13812PPR_3Pentatricopeptide repeat domainQ96EY7
PF13825Paramyxo_P_V_NParamyxovirus structural protein V/P N-terminus
PF13831PHD_2PHD-fingerP55197
PF13839PC-EsteraseGDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1pQ9LY46
PF13876Phage_gp49_66Phage protein (N4 Gp49/phage Sf6 gene 66) family
PF13884Peptidase_S74Chaperone of endosialidaseQ3UR85
PF13914PhostensinPhostensin PP1-binding and SH3-binding region
PF13916Phostensin_NPP1-regulatory protein, Phostensin N-terminal
PF13918PLDc_3PLD-like domain
PF13922PHD_3PHD domain of transcriptional enhancer, Asx
PF13953PapC_CPapC C-terminal domainP07110
PF13954PapC_NPapC N-terminal domainP07110
PF13962PGGDomain of unknown function
PF13969Pab87_octPab87 octamerisation domainQ9V2D6
PF13994PgaDPgaD-like protein
PF14000Packaging_FIDNA packaging protein FIP03709
PF14009PADREPADRE domain
PF14010PEPcase_2Phosphoenolpyruvate carboxylaseQ8XLE8
PF14032PknH_CPknH-like extracellular domainA0R5N2
PF14058PcfKPcfK-like protein
PF14065Pvc16_NPvc16 N-terminal domainQ8YRW5
PF14083PGDYGPGDYG protein
PF14099Polysacc_lyasePolysaccharide lyaseQ89YQ6
PF14121Porin_10Putative porin
PF14245Pilin_PilAType IV pilin PilA
PF14251PterinBD-DUF4346PterinBD-DUF4346
PF14281PDDEXK_4PD-(D/E)XK nuclease superfamily
PF14284PcfJPcfJ-like protein
PF14295PAN_4PAN domainP81860
PF14299PP2Phloem protein 2Q94EW1
PF14306PUA_2PUA-like domainO95340
PF14324PINITPINIT domainQ12216
PF14341PilX_NPilX N-terminal
PF14343PrcB_CPrcB C-terminal
PF14360PAP2_CPAP2 superfamily C-terminal
PF14378PAP2_3PAP2 superfamily
PF14416PMR5NPMR5 N terminal DomainQ9LY46
PF14427Pput2613-deamPput_2613-like deaminase
PF14445Prok-RING_2Prokaryotic RING finger family 2
PF14446Prok-RING_1Prokaryotic RING finger family 1
PF14447Prok-RING_4Prokaryotic RING finger family 4P22681
PF14449PT-TGPre-toxin TG
PF14454Prok_UbProkaryotic Ubiquitin
PF14457Prok-E2_AProkaryotic E2 family A
PF14459Prok-E2_CProkaryotic E2 family C
PF14460Prok-E2_DProkaryotic E2 family D
PF14461Prok-E2_BProkaryotic E2 family B
PF14462Prok-E2_EProkaryotic E2 family E
PF14464Prok-JABProkaryotic homologs of the JAB domainQ8U1Y4
PF14466PLCCPLAT/LH2 and C2-like Ca2+-binding lipoproteinA7M5D7
PF14549P22_CroDNA-binding transcriptional regulator CroQ37964
PF14550Peptidase_S78_2Putative phage serine protease XkdF
PF14566PTPlike_phytaseInositol hexakisphosphateA0A378K9X8
PF14572Pribosyl_synthPhosphoribosyl synthetase-associated domainP60891
PF14573PP-binding_2Acyl-carrierD0VWT5
PF14583Pectate_lyase22Oligogalacturonate lyaseA1JMA5
PF14593PH_3PH domainO15530
PF14598PAS_11PAS domainP53762
PF14610Psg1Ykl077w/Psg1 (Pma1 Stabilization in Golgi)
PF14659Phage_int_SAM_3Phage integrase, N-terminal SAM-like domainQ2RHJ2
PF14667Polysacc_synt_CPolysaccharide biosynthesis C-terminal domain
PF14685PDZ_TricornTricorn protease PDZ domainP96086
PF14703PHM7_cytCytosolic domain of 10TM putative phosphate transporterQ5TKG1
PF14719PID_2Phosphotyrosine interaction domain (PTB/PID)
PF14727PHTB1_NPTHB1 N-terminalQ3SYG4
PF14728PTHB1_GAEPTHB1 GAE domainQ3SYG4
PF14748P5CR_dimerPyrroline-5-carboxylate reductase dimerisationP32322
PF14765PS-DHPolyketide synthase dehydratase N-terminal domainA0A2N9BJK0
PF14812PBP1_TMTransmembrane domain of transglycosylase PBP1 at N-terminal
PF14844PH_BEACHPH domain associated with Beige/BEACHP50851
PF14850Pro_dh-DNA_bdgDNA-binding domain of Proline dehydrogenaseF7X6I3
PF14855PapJPilus-assembly fibrillin subunit, chaperone
PF14870PSII_BNRPhotosynthesis system II assembly factor YCF48Q8DI95
PF14874PapD-likeFlagellar-associated PapD-likeA0A2K3CP55
PF14875PIP49_NN-term cysteine-rich ER, FAM69
PF14888PBP-Tp47_cPenicillin-binding protein Tp47 domain CP29723
PF14889PBP-Tp47_aPenicillin-binding protein Tp47 domain aP29723
PF14891Peptidase_M91Effector protein
PF14892PIRC1_2Piercer of microtubule wall 1/2Q5BN46
PF14893PNMAPNMA
PF14895PPPI_inhibProtein phosphatase 1 inhibitor
PF14936p53-inducible11Tumour protein p53-inducible protein 11
PF14958PAAT-likeATPase PAAT-like
PF14974P_C10Protein C10
PF15028PTCRAPre-T-cell antigen receptorQ6ISU1
PF15060PPDFLDifferentiation and proliferation regulator
PF15099PIRTPhosphoinositide-interacting protein family
PF15150PMAIP1Phorbol-12-myristate-13-acetate-inducedQ13794
PF15159PIG-YPhosphatidylinositol N-acetylglucosaminyltransferase subunit Y
PF15172Prolactin_RPProlactin-releasing peptide
PF15174PRNTPrion-related protein testis-specific
PF15205PLAC9Placenta-specific protein 9
PF15214PXT1Peroxisomal testis-specific protein 1Q8NFP0
PF15229POM121POM121 family
PF15237PTRF_SDPRPTRF/SDPR familyA1L260
PF15240Pro-richProline-rich protein
PF15275PEHEPEHE domainQ68DK7
PF15276PP1_bindProtein phosphatase 1 bindingP46013
PF15284PAGKPhage-encoded virulence factor
PF15302P33MONOXP33 mono-oxygenase
PF15314PRAPProline-rich acidic protein 1, pregnancy-specific uterine
PF15322PMSI1Protein missing in infertile sperm 1, putative
PF15347PAGPhosphoprotein associated with glycosphingolipid-enriched
PF15364PAXIP1_CPAXIP1-associated-protein-1 C term PTIP binding protein
PF15365PNRCProline-rich nuclear receptor coactivator motifQ10108
PF15384PAXXPAXX, PAralog of XRCC4 and XLF, also called C9orf142Q9BUH6
PF15404PH_4Pleckstrin homology domain
PF15405PH_5Pleckstrin homology domain
PF15406PH_6Pleckstrin homology domain
PF15409PH_8Pleckstrin homology domainP38713
PF15410PH_9Pleckstrin homology domainO15020
PF15411PH_10Pleckstrin homology domain
PF15413PH_11Pleckstrin homology domain
PF15421Polysacc_deac_3Putative polysaccharide deacetylaseA7M1K9
PF15436PGBA_NPlasminogen-binding protein pgbA N-terminal
PF15437PGBA_CPlasminogen-binding protein pgbA C-terminal
PF15438Phyto-AmpAntigenic membrane protein of phytoplasma
PF15453PiltProtein incorporated later into Tight Junctions
PF15455Pro-rich_19Proline-rich 19
PF15473PCNPPEST, proteolytic signal-containing nuclear protein family
PF15499Peptidase_C98Ubiquitin-specific peptidase-like, SUMO isopeptidaseQ5W0Q7
PF15503PPP1R35_CProtein phosphatase 1 regulatory subunit 35 C-terminus
PF15549PGC7_StellaPGC7/Stella/Dppa3 domainQ8QZY3
PF15608PELOTA_1PELOTA RNA binding domain
PF15609PRTase_2Phosphoribosyl transferase
PF15610PRTase_3PRTase ComF-like
PF15621PROL5-SMRProline-rich submaxillary gland androgen-regulated family
PF15629Perm-CXXCPermuted single zf-CXXC unitQ9SJQ6
PF15671PRR18Proline-rich protein family 18
PF15691PPP1R32Protein phosphatase 1 regulatory subunit 32
PF15698PhosphatasePhosphatase
PF15708PRR20Proline-rich protein family 20
PF15713PTPRCAPProtein tyrosine phosphatase receptor type C-associated
PF15715PAFPCNA-associated factor histone like domain
PF15717PCM1_CPericentriolar material 1 C terminus
PF15740PPP1R26_NProtein phosphatase 1 regulatory subunit 26 N-terminus
PF15776PRR22Proline-rich protein family 22
PF15781ParE-like_toxinParE-like toxin of type II bacterial toxin-antitoxin system
PF15786PET117PET assembly of cytochrome c oxidase, mitochondrial
PF15798PRASProline-rich AKT1 substrate 1Q96B36
PF15826PUMABcl-2-binding component 3, p53 upregulated modulator of apoptosis
PF15861partial_CstFPartial cleavage stimulation factor domain
PF15864PglL_AProtein glycosylation ligase
PF15887Peptidase_MxPutative zinc-binding metallo-peptidase
PF15890Peptidase_Mx1Putative zinc-binding metallo-peptidaseA5ZEW7
PF15898PRKG1_interactcGMP-dependent protein kinase interacting domainO14974
PF15903PL48Filopodia upregulated, FAM65
PF15917Piezo_TM25-28Piezo TM25-28E2JF22
PF15937PrlF_antitoxinprlF antitoxin for toxin YhaV_toxin
PF15953PDU_likePutative propanediol utilisation
PF15996PNISRArginine/serine-rich protein PNISR
PF16015PromethinPromethin
PF16021PDCD7Programmed cell death protein 7
PF16074PilWType IV Pilus-assembly protein W
PF16079Phage_holin_5_2Phage holin family Hol44, in holin superfamily V
PF16080Phage_holin_2_3Bacteriophage holin family HP1
PF16081Phage_holin_7_1Mycobacterial 2 TMS Phage Holin (M2 Hol) Family
PF16082Phage_holin_2_4Bacteriophage holin family, superfamily II-like
PF16083Phage_holin_3_3LydA holin phage, holin superfamily III
PF16085Phage_holin_3_5Bacteriophage holin Hol, superfamily III
PF16093PAC4Proteasome assembly chaperone 4Q5JS54
PF16094PAC1Proteasome assembly chaperone 4
PF16101PRIMA1Proline-rich membrane anchor 1
PF16187Peptidase_M16_MMiddle or third domain of peptidase_M16P14735
PF16188Peptidase_M24_CC-terminal region of peptidase_M24A0A144A2H0
PF16192PMT_4TMCC-terminal four TMM region of protein-O-mannosyltransferaseP31382
PF16209PhoLip_ATPase_NPhospholipid-translocating ATPase N-terminalP32660
PF16212PhoLip_ATPase_CPhospholipid-translocating P-type ATPase C-terminalP32660
PF16218Peptidase_C101Peptidase family C101Q96BN8
PF16242Pyrid_ox_likePyridoxamine 5'-phosphate oxidase likeQ8PK08
PF16289PIN_12PIN domain
PF16325Peptidase_U32_CPeptidase family U32 C-terminal domainG8N3E1
PF16357PepSY_TM_like_2Putative PepSY_TM-like
PF16361Peptidase_S8_NN-terminal of Subtilase family
PF16407PKD_2PKD-like family
PF16450Prot_ATP_ID_OB_CProteasomal ATPase OB C-terminal domainP9WQN5
PF16452Phage_CI_CBacteriophage CI repressor C-terminal domainP08707
PF16454PI3K_P85_iSH2Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domainP27986
PF16457PH_12Pleckstrin homology domainQ92556
PF16459Phage_TAC_13Phage tail assembly chaperone, TAC
PF16460Phage_TTP_11Phage tail tube, TTP, lambda-like
PF16461Phage_TTP_12Lambda phage tail tube protein, TTPP03733
PF16462Phage_TAC_14Phage tail assembly chaperone protein, TAC
PF16463Phage_TTP_13Phage tail tube protein family
PF16485PLN_propepProtealysin propeptideQ5MJ80
PF16491Peptidase_M48_NCAAX prenyl protease N-terminal, five membrane helicesO75844
PF16510P22_portalPhage P22-like portal proteinQ716H2
PF16532Phage_tail_NKSf6-type phage tail needle knob or tip of some CaudoviralesQ716G6
PF16542PNKP_ligasePNKP adenylyltransferase domain, ligase domainC2M8N4
PF16553PUFDBCORL-PCGF1-binding domainQ5H9F3
PF16563P66_CCCoiled-coil and interaction region of P66A and P66B with MBD2Q86YP4
PF16599PTN13_u3Unstructured linker region on PTN13 protein between PDZ
PF16616PHC2_SAM_assocUnstructured region on Polyhomeotic-like protein 1 and 2
PF16626Papilin_u7Linking region between Kunitz_BPTI and I-set on papilin
PF16652PH_13Pleckstrin homology domainQ15811
PF16655PhoD_NPhoD-like phosphatase, N-terminal domainP42251
PF16656Pur_ac_phosph_NPurple acid Phosphatase, N-terminal domainP80366
PF16660PHD20L1_u1PHD finger protein 20-like protein 1
PF16670PI-PLC-C1Phosphoinositide phospholipase C, Ca2+-dependentA0A1S4NYD4
PF16686POT1PCssDNA-binding domain of telomere protection proteinQ9NUX5
PF16734Pilin_GHType IV pilin-like G and H, putative
PF16737PHF12_MRG_bdPHD finger protein 12 MRG binding domainQ96QT6
PF16743PliIPeriplasmic lysozyme inhibitor of I-type lysozymeA0KHJ5
PF16754PesticinBacterial toxin homologue of phage lysozyme, C-termQ57159
PF16756PALB2_WD40Partner and localizer of BRCA2 WD40 domainQ86YC2
PF16765PimPesticin immunity protein
PF16773Phage_SSBLactococcus phage single-stranded DNA binding proteinQ09WL7
PF16778Phage_tail_APCPhage tail assembly chaperone proteinQ7P0Y9
PF16795Phage_integr_3Archaeal phage integraseP20214
PF16807Phage_tail_terminator_4Putative tail termination proteinA0A0H3G917
PF16808PKcGMP_CCCoiled-coil N-terminus of cGMP-dependent protein kinaseQ13976
PF16820PKD_3PKD-like domainQ8A6C8
PF16836PSY3Shu complex component Psy3, DNA-binding descriptionQ12318
PF16866PHD_4PHD-fingerQ9Y2K7
PF16872putAbiCPutative phage abortive infection protein
PF16896PGDH_CPhosphogluconate dehydrogenase (decarboxylating) C-termF8GV06
PF16904PurL_CPhosphoribosylformylglycinamidine synthase II C-terminusQ9X0X3
PF16911PapA_CPhthiocerol/phthiodiolone dimycocerosyl transferase C-terminusP9WIN5
PF16913PUNUTPurine nucleobase transmembrane transport
PF16918PknG_TPRProtein kinase G tetratricopeptide repeatQ8NM29
PF16919PknG_rubredProtein kinase G rubredoxin domainP9WI73
PF16930Porin_5Putative porin
PF16931Phage_holin_8Putative phage holin
PF16933PelGPutative exopolysaccharide Exporter (EPS-E)
PF16938Phage_holin_Dp1Putative phage holin Dp-1
PF16939Porin_6Putative porin
PF16945Phage_r1t_holinPutative lactococcus lactis phage r1t holin
PF16946Porin_OmpG_1_2OMPG-porin 1 family
PF16953PRORPProtein-only RNase PO15091
PF16956Porin_7Putative general bacterial porinA0A081GU02
PF16958PRP9_NPre-mRNA-splicing factor PRP9 N-terminusP19736
PF16963PelD_GGDEFPelD GGDEF domainQ9HZE7
PF16966Porin_8Porin-like glycoporin RafY
PF17022PTP2Polar tube protein 2 from Microsporidia
PF17033Peptidase_M99Carboxypeptidase controlling helical cell shape catalyticB5ZAD9
PF17061PARMPARM
PF17063PSMalphaPhenol-soluble modulin alpha peptide familyP0C805
PF17092PCB_OBPenicillin-binding protein OB-like domainP31776
PF17093PBP_NPenicillin-binding protein N-terminus
PF17111PigL_NPigment biosynthesis cluster protein PigL N-terminal
PF17129Peptidase_M99_CC-terminal domain of metallo-carboxypeptidaseB5ZAD9
PF17130Peptidase_M99_mbeta-barrel domain of carboxypeptidase M99B5ZAD9
PF17146PIN_6PIN domain of ribonucleaseQ08444
PF17147PFOR_IIPyruvate:ferredoxin oxidoreductase core domain IIP94692
PF17177PPR_longPentacotripeptide-repeat region of PRORPC9ZIL7
PF17205PSI_integrinIntegrin plexin domainP26012
PF17232Pep1_7Elicitor peptide 1-7
PF17243POTRA_TamA_1POTRA domain TamA domain 1W1WMC8
PF17251PomProtochlamydia outer membrane protein
PF17285PRMT5_TIMPRMT5 TIM barrel domainO14744
PF17286PRMT5_CPRMT5 oligomerisation domainO14744
PF17287POTRA_3POTRA domainQ3YL97
PF17292POB3_NPOB3-like N-terminal PH domainF2QNN8
PF17297PEPCK_NPhosphoenolpyruvate carboxykinase N-terminal domainP07379
PF17316Perilipin_2Perilipin protein
PF17339PH_15PH domain
PF17356PBSX_XtrAPhage-like element PBSX protein XtrA
PF17362pXO2-34Family of unknown function
PF17426Putative_G5PPutative Gamma DNA binding protein G5P
PF17427Phi29_Phage_SSBPhage Single-stranded DNA-binding protein
PF17443pXO2-72Uncharacterized protein pXO2-72
PF17481Phage_sheath_domIIPhage tail sheath protein beta-sandwich domainQ92CB1
PF17482Phage_sheath_1CPhage tail sheath C-terminal domainQ8YRW7
PF17499PilosulinAnt venom peptides
PF17516ProQ_CProQ C-terminal domainP45577
PF17550PsaFFamily of unknown function
PF17585Phage_ArfAccessory recombination function protein
PF17667Pkinase_fungalFungal protein kinase
PF17676Peptidase_S66CLD-carboxypeptidase C-terminal domainC3XA61
PF17721POU2AF2POU domain class 2-associating factor 2
PF17758Prot_ATP_ID_OB_NProteasomal ATPase OB N-terminal domainP9WQN5
PF17764PriA_3primeBD3'DNA-binding domain (3'BD)A0A1W2ITH4
PF17769PurK_CPhosphoribosylaminoimidazole carboxylase C-terminal domainQ5NGE8
PF17785PUA_3PUA-like domainQ5SI81
PF17787PH_14PH domainQ01970
PF17815PDZ_3PDZ domainQ9FL12
PF17816PDZ_4PDZ domainO84866
PF17817PDZ_5PDZ domainO35867
PF17820PDZ_6PDZ domainO43464
PF17827PrmC_NPrmC N-terminal domainP0ACC1
PF17831PDH_E1_MPyruvate dehydrogenase E1 component middle domainP0AFG9
PF17832Pre-PUAPre-PUA-like domainQ9ULC4
PF17833pre-PUA_NIP7NIP7/UPF0113, pre-PUA domainQ1MTQ9
PF17836PglD_NPglD N-terminal domainA0A334FGR6
PF17838PH_16PH domainQ6P9R4
PF17859PelovaterinPelovaterinP84818
PF17899Peptidase_M61_NPeptidase M61 N-terminal domainQ5QTY1
PF17900Peptidase_M1_NPeptidase M1 N-terminal domainO96935
PF17941PP_kinase_C_1Polyphosphate kinase C-terminal domain 1Q7MTR1
PF17949PNDFANCM pseudonuclease domainQ9BTP7
PF17954Pirin_C_2Quercetinase C-terminal cupin domainP46852
PF17967Pullulanase_N2Pullulanase N2 domainW9BQ28
PF17987PMT2_NPhosphoethanolamine N-methyltransferase 2 N-terminalU5HK48
PF17999PulA_N1Pullulanase N1-terminal domainK9L0H1
PF18012PH_17PH domainQ61234
PF18013Phage_lysozyme2Phage tail lysozymeP15132
PF18027Pepdidase_M14_NCytosolic carboxypeptidase N-terminal domainB4EEQ5
PF18047PatG_DPatG DomainQ52QJ1
PF18064ParB_CCentromere-binding protein ParB C-terminalQ6EEF9
PF18065PatG_CPatG C-terminalQ52QJ1
PF18066Phage_ABA_SPhage ABA sandwich domainQ81EU2
PF18074PriA_CPrimosomal protein N C-terminal domainA0A1W2ITH4
PF18083PutA_NProline utilization A N-terminal domainQ746X3
PF18086PPIP5K2_NDiphosphoinositol pentakisphosphate kinase 2 N-terminal domainO74429
PF18095PAS_12UPF0242 C-terminal PAS-like domain
PF18100PDE4_UCRPhosphodiesterase 4 upstream conserved regions (UCR)Q08499
PF18101Pan3_PKPan3 Pseudokinase domainP36102
PF18105PGM1_CPGM1 C-terminal domainA0A0A6YVN3
PF18118PRC2_HTH_1Polycomb repressive complex 2 tri-helical domainQ92800
PF18140PCC_BTPropionyl-coenzyme A carboxylase BT domainC5AWU5
PF18154pPIWI_RE_REaseREase associating with pPIWI_RE
PF18155pPIWI_RE_ZpPIWI RE three-gene island domain Z
PF18156pPIWI_RE_YpPIWI_RE three-gene island domain Y
PF18165pP_pnuc_1Predicted pPIWI-associating nuclease
PF18166pP_pnuc_2Predicted pPIWI-associating nuclease
PF18168PPL5Prim-pol family 5
PF18188PPL4Prim-pol 4
PF18190Plk4_PB1Polo-like Kinase 4 Polo Box 1O00444
PF18191PnpCD_PnpD_NHydroquinone 1,2-dioxygenase large subunit N-terminalF8TW83
PF18201PIH1_CSPIH1 CS-like domainQ9NWS0
PF18204PGF-CTERMPGF-CTERM motifP25062
PF18206Porphyrn_cat_1Porphyranase beta-sandwich domain 1A0A516RTC5
PF18222PilN_bio_dPilN biogenesis protein dimerization domainQ5SII9
PF18223PilJ_CPili PilJ C-terminal domain
PF18240PSII_Pbs31Photosystem II Psb31 proteinA0A5J4Z270
PF18262PhetRS_B1Phe-tRNA synthetase beta subunit B1 domainQ8IIW2
PF18264preSET_CXCCXC domainQ92800
PF18294Pept_S41_NPeptidase S41 N-terminal domainA0A380YY03
PF18295Pdase_M17_N2M17 aminopeptidase N-terminal domain 2Q4QH17
PF18301preATP-grasp_3pre ATP-grasp 3 domainO29201
PF18309PAZ_3Argonaute PAZ domainQ746M7
PF18327PRODHProline utilization A proline dehydrogenase N-terminal domainF7X6I3
PF18328PfaD_NFatty acid synthase subunit PfaD N-terminal domainB8CQB6
PF18331PKHD_CPKHD-type hydroxylase C-terminal domainA3D8P6
PF18349PAZ_4PAZ domainO67434
PF18353PG_isomerase_NPhosphoglucose isomerase N-terminal domainQ5SIM3
PF18363PI_PP_IPhosphoinositide phosphatase insertion domainD3HMN4
PF18365PI_PP_CPhosphoinositide phosphatase C-terminal domainD3HMN4
PF18369PKS_DEPolyketide synthase dimerisation element domainB6ZK67
PF18409Plk4_PB2Polo-like Kinase 4 Polo Box 2O00444
PF18421Peptidase_M23_NPeptidase family M23 N-terminal domainQ9HXK8
PF18457PUD1_2Up-Regulated in long-lived daf-2G5EBF3
PF18459PCSK9_C1Proprotein convertase subtilisin-like/kexin type 9 C-terminal domainQ8NBP7
PF18463PCSK9_C3Proprotein convertase subtilisin-like/kexin type 9 C-terminal domainQ8NBP7
PF18464PCSK9_C2Proprotein convertase subtilisin-like/kexin type 9 C-terminal domainQ8NBP7
PF18468Pfk_NPhosphofructokinase N-terminal domain yeastQ8NJU8
PF18469PH_18Pleckstrin homology domainP40161
PF18475PIN7PIN domain
PF18476PIN_8PIN like domain
PF18477PIN_9PIN like domainO29664
PF18478PIN_10PIN like domain
PF18479PIN_11PIN like domain
PF18482Pih1_fungal_CSFungal Pih1 CS domainP38768
PF18486PUB_1PNGase/UBA- or UBX-containing domainQ96EP0
PF18494Pullulanase_InsPullulanase Ins domainW9BQ28
PF18513Pro_sub2Prodomain subtilisin 2O97364
PF18531Polo_box_2Polo box domainQ9GT24
PF18544Polo_box_3Polo box domainQ9GT24
PF18552PheRS_DBD1PheRS DNA binding domain 1Q9Y285
PF18553PheRS_DBD3PheRS DNA binding domain 3Q9Y285
PF18554PheRS_DBD2PheRS DNA binding domain 2Q9Y285
PF18587PLLPTX/LNS-Like (PLL) domainQ8K209
PF18604PreAtp-graspPre ATP-grasp domainA0A0A6YVN3
PF18610Peripla_BP_7Periplasmic binding protein domainQ08255
PF18627PgdA_NPeptidoglycan GlcNAc deacetylase N-terminal domainQ8DP63
PF18628P2_NViral coat protein P2 N-terminal domainP15794
PF18630Peptidase_M60_CPeptidase M60 C-terminal domainQ51844
PF18644Phage_int_SAM_6Phage integrase SAM-like domainO25386
PF18663PallilysinPallilysin beta barrel domainO83732
PF18672PilZN1N-terminal PilZ-like domain PilZN1Q748G9
PF18682PilA4Pilin A4Q5SIZ2
PF18684PlyB_CPleurotolysin B C-terminal domainQ5W9E8
PF18689PriXPrimase XQ97ZS7
PF18714PI-TkoII_IVDNA polymerase II intein Domain IVP77933
PF18715Phage_spikePhage spike trimerQ9T1V4
PF18736pEK499_p136HEPN pEK499 p136
PF18751Ploopntkinase3P-loop Nucleotide Kinase3
PF18759PlavakaPlavaka transposase
PF18765PolbetaPolymerase beta, NucleotidyltransferaseQ8ECH7
PF18809PBECR1phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease1
PF18810PBECR2phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease2
PF18812PBECR3phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3
PF18813PBECR4phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease4
PF18814PBECR5phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease5
PF18861PTP_tmTM proximal of protein tyrosine phosphatase, receptor type J
PF18878PPE-PPWPPE-PPW subfamily C-terminal region
PF18894PhageMetallopepPutative phage metallopeptidase
PF18906Phage_tube_2Phage tail tube proteinA7XXS2
PF18911PKD_4PKD domainQ9EPR5
PF18933PsbP_2PsbP-like protein
PF18962Por_Secre_tailSecretion system C-terminal sorting domainA0A516RTC5
PF18967PycTMPycsar effector protein
PF18994Prophage_tailD1Prophage endopeptidase tail N-terminal domainQ8Y4Z4
PF18995PRT6_CProteolysis_6 C-terminalP19812
PF19019Phlebo_G2_CPhlebovirus glycoprotein G2 C-terminal domainA0A016UZK2
PF19044P-loop_TraGTraG P-loop domainO50330
PF19050PhoD_2PhoD related phosphatase
PF19057PH_19PH domainP11274
PF19065P8_CRMinor capsid protein P8 central region
PF19066P9_TMMinor capsid protein P9 transmembrane helicesQ98459
PF19199Phage_coatGP8Phage major coat protein, Gp8P03620
PF19224pATOM36pATOM36 family
PF19244Poly_A_pol_catPoly(A) polymerase catalytic subunitQ5UQS6
PF19274PI4K_NPI4-kinase N-terminal regionP42356
PF19281PHYHIP_CPhytanoyl-CoA hydroxylase-interacting protein C-terminus
PF19289PmbA_TldD_3rdPmbA/TldA metallopeptidase C-terminal domainQ5JD94
PF19290PmbA_TldD_2ndPmbA/TldA metallopeptidase central domainQ5JD94
PF19304PGDH_interD-3-phosphoglycerate dehydrogenase intervening domainP9WNX3
PF19316PIGO_PIGGGPI ethanolamine phosphate transferase membrane region
PF19406PKD_5PKD-like domain
PF19408PKD_6PKD-like domain
PF19501PcRGLX_1stPcRGLX-like N-terminal RIFT barrel domainB6H7Q7
PF19536POU2F1_CPOU domain, class 2, transcription factor 1 C-terminal
PF19556PRTRC_EPRTRC system protein E
PF19572PorVType IX secretion system protein PorVA5FJM7
PF19710PIK3CG_ABDPIK3 catalytic subunit gamma adaptor-binding domainP48736
PF19821Phage_capsid_2Phage capsid protein
PF20168PDS5Sister chromatid cohesion protein PDS5 proteinQ96HW7
PF20170Plexin_RBDPlexin cytoplasmic RhoGTPase-binding domainB2RXS4
PF20235PIR2-like_helicalPIR2-like, helical domain
PF20260PUA_4RNA methyltransferase PUA domainQ5F4Y3
PF20300prok_STINGProkaryotic STING domainA0A2T5Y4G4
PF20301pNTSase1Predicted novel nucleotide synthetase
PF20305pYEATSprokaryotic YEATS domain
PF20393Pro_CA_2Putative carbonic anhydrase
PF20399PH_20PH domain
PF20424PilZN3PilZN3 domainO51675
PF20433PKAT_KLDPKAT, KLD domain
PF20463PDH_CPrephenate dehydrogenase, dimerization domainQ81P63
PF20472PDDEXK_11PD-(D/E)XK nuclease superfamily domain
PF20474PHLPHL domain
PF20478P2RX7_CP2X purinoreceptor 7 intracellular domainQ64663
PF20511PMI_typeI_catPhosphomannose isomerase type I, catalytic domainP25081
PF20512PMI_typeI_helPhosphomannose isomerase type I, helical insertion domainP25081
PF20516PDDEXK_12PD-(D/E)XK nuclease superfamily
PF20519Polycystin_domPolycystin domainA2A259
PF20577Phage_ORF5Phage ORF5 protein
PF20585Pectate_lyase_5Putative pectate lyase-like adhesive domainA0A384E0N5
PF20592pAdhesive_10Putative adhesin domain (group 10)
PF20595pAdhesive_6Putative adhesive domain (group 6)
PF20596pAdhesive_11Putative adhesive domain (group 11)
PF20597pAdhesive_15Putative Ice-binding-like adhesive domainQ76CE6
PF20602pAdhesive_8Putative adhesive domain (group 8)
PF20608Phage_tube_CPhage tail tube protein C-terminal domain
PF20609pAdhesive_17Putative adhesive domain (group 17)
PF20698PIN-TPR-GreABCPIN domain associated with the TPR-GreAB-C-PIN system
PF20723Pellino_RINGPellino, RING domain
PF20729PE-PGRS_CPE-PGRS C-terminal aspartyl peptidase-like domain
PF20734PA2201_NPA2201 N-terminal domain-like
PF20750PAP_NTPasePoly(A) polymerase nucleotidyltransferase domain
PF20765Phage_tail_terminator_8Phage tail terminator protein
PF20770PAN2_NPAN2 N-terminal
PF20796PDDEXK_13PD-(D/E)XK nuclease superfamily
PF20799PIMT_CProtein-L-isoaspartyl O-methyltransferase, C-terminal domain
PF20803PaaX_MPaaX protein central Cas2-like domain
PF20811PARG_cat_NPoly (ADP-ribose) glycohydrolase (PARG), helical domain
PF20812PM2_P3Bacteriophage PM2, Viral membrane protein P3
PF20826PHD_5PhD finger domain
PF20827PCF11_chargedPCF11, charged region
PF20835PA_Ig-likeAnthrax protective antigen, immunoglobulin-like domain
PF20844PCF11_RFEG_rptPre-mRNA cleavage complex 2 protein Pcf11, RFEGP repeat
PF20845Pcf11_helicalPre-mRNA cleavage complex 2 protein Pcf11, alpha-helical domain
PF20846PNMA_NPNMA N-terminal RRM-like domain
PF20847PNM8AParaneoplastic antigen 8A protein
PF20873PriS_CPrimase chain A, C-terminal domain
PF20886PWP3A-B_CPWWP domain-containing DNA repair factor 3A/B, C-terminal
PF20887PWP3A-B_NPWWP domain-containing DNA repair factor 3A/B, N-terminal
PF20895PsV_CPPsV, capsid protein
PF20898P_T4SS_TraNP-type Type IV secretion system, TraN
PF20899PMT_C2Pasteurella multocida toxin, C2 domain
PF20900PMT_C3Pasteurella multocida toxin, C3 domain
PF20929PDCD10_NProgrammed cell death protein 10, dimerisation domain
PF20934phi29_gp9_CBacillus phage phi29, Tail knob protein gp9, C-terminal domain
PF20962Phage_p2_ORF12Lactococcus lactis phage p2, ORF12
PF20976Pop8Ribonucleases P/MRP protein subunit Pop8
PF20984PT26-6P_helicalPT26-6P, helical domain
PF21024Peptidase_A3BPeptidase A3B
PF21032PROPPINPROPPIN
PF21089PKS_DH_NPolyketide synthase dehydratase domain
PF21090P-loop_SecASecA P-loop domain
PF21098PH-GRAM_MTMR6-likeMTMR6-9, GRAM domain
PF21099POLQ_helicalDNA_pol_Q helicase like region helical domain
PF21103PH1_SSRP1-likeSSRP1 PH domain
PF21160PrkC-like_PASTA-likeSerine/threonine protein kinase-like, C-terminal PASTA-like domain
PF21161P2R3B_EF-handP2R3B, EF-hand
PF21171PDE12-like_N2',5'-phosphodiesterase 12-like, N-terminal domain
PF21189PHA02142PHA02142 OB-fold domain
PF21196PcrA_UvrD_tudorPcrA/UvrD tudor domain
PF21197PgaA_barrelPgaA membrane beta barrel domain
PF21213PriA-like_WHPrimosomal protein N'-like, winged helix
PF21216PepQ_NXaa-Pro dipeptidase, N-terminal domain
PF21217PaaA2Stability determinant
PF21234Phosphatase-like_NProtein-tyrosine-phosphatase-like, N-terminal domain
PF21236PRS7_OB26S proteasome regulatory subunit 7, OB domain
PF21237Pus10_N_eukEukaryotic Pus10, N-terminal
PF21238Pus10_CPus10, C-terminal
PF21244PurT_CPurT, C-terminal
PF21245PI4KB-PIK1_PIKPI4KB/PIK1, accessory (PIK) domain
PF21257PHD_ash2p_likeASH2, PHD zinc finger
PF21294Polysacc_lyase_14Polysaccharide lyase 14
PF21311Phage_RBD_propPhage 5-bladed beta propeller receptor binding platform domain
PF21337Peptidase_M17_N_1M17 aminopeptidase, N-terminal domain
PF21340Polysacc_lyase-likeCip1-like, core domain
PF21345PcRGLX_2ndPcRGLX-like protein central beta sandwich domain
PF21346PcRGLX_3rdPcRGLX-like protein C-terminal alpha/alpha toroid domain
PF21353Per3-like_PAS-APeriod circadian protein homolog 3-like, PAS-A domain
PF21360PylC-like_NPylC-like, N-terminal domain
PF21370PAS_GdpPCyclic-di-AMP phosphodiesterase GdpP-like, PAS domain
PF21375POT1_C_insertProtection of telomeres protein 1 (POT1), C-terminal insertion domain
PF21398PG_binding_5Putative peptidoglycan-binding domain
PF21447Ppx-GppA_IIIPpx/GppA phosphatase, domain III
PF21455PylD_NPyrrolysine biosynthesis protein PylD, N-terminal domain
PF21462PsaSPh 6 antigen
PF21475PaaA-like_NPaaA-like, N-terminal domain
PF21476PF0610-like_NPF0610-like, N-terminal
PF21480PlyCA_NPlyCA, N-terminal domain
PF21494PKC_C2Protein kinase C delta/epsilon/eta/theta, C2 domain
PF21510PirA-likePirA-like
PF21523ParM_NPlasmid segregation protein ParM, C-terminal
PF21526PGRSPGRS repeats
PF21530Pif1_2B_domDNA helicase Pif1, 2B domain
PF21544PorZ_N_b_propellerTSS9, PorZ, N-terminal beta-propeller domain
PF21549PRDM2_PRPR domain zinc finger protein 2, PR domain
PF21558Pept_S41_N_bactBacteroidetes, Peptidase, S41 family, N-terminal domain
PF21577PG_0320-like_CPG_0320-like, C-terminal domain
PF21579PabTrmU54_TRAM_domtRNA (uracil(54)-C(5))-methyltransferase, TRAM domain
PF21598PvuRts1I-like_NRestriction endonuclease PvuRts1 I-like, N-terminal
PF21613Pesticin_RBPesticin, receptor binding domain
PF21636PPP1R21_CProtein phosphatase 1 regulatory subunit 21, C-terminal
PF21653pulA_all-betaPullulanase, all-beta domain
PF21684PipB2_NSecreted effector protein PipB2, N-terminal domain
PF21697Ppx_CExopolyphosphatase, C-terminal
PF21704POLH-Rev1_HhHDNApol eta/Rev1, HhH motif
PF21728PADR1_NPADR1, N-terminal helical domain
PF21743PTM_DIR17_TudorPTM/DIR17-like, Tudor domain
PF21745PMI1_PMIR1-2_CPMI1/PMIR1-2, C-terminal domain
PF21758PAC_bacBacterial proteasome assembling chaperone-like protein
PF21775PutA_1stPutA, RHH domain
PF21782PKMT_2ndPKMT, C-terminal winged helix domain
PF21807PfEMP1_CIDRalpha1_domPfEMP1 protein, CIDRalpha1 domain
PF21815PAS_PdeAPdeA-like PAS domain
PF21822Phage_TAC_15Phage tail assembly chaperone protein, TAC
PF21877PH_NF1PH domain-like
PF21902PTM1-like_NPTM1-like, N-terminal domain
PF21911PG_1098_NN-terminal domain in putative methyltransferase PG_1098
PF21919P23-45_portal_barrelPhage P23-45 portal protein
PF21922PBP_dimer_2Penicillin binding protein A dimerisation domain
PF21936Pcf11_CPcf11, C-terminal domain
PF21940Pfc11_Rna14-15-IDPfc11 Rna14/15 interacting domain
PF22006PilZ-likePilZ domain-like
PF22013PG_1098_FerPG_1098 ferredoxin-like domain
PF22022Phage_int_MPhage integrase central domain
PF22023Pus10_THUMP_arcPus10 THUMP domain, archaeal
PF22029PhyR_sigma2Sigma2 domain of PhyR
PF22037PSD13_NPSD13 N-terminal repeats
PF22038PRC2_EED_insPolycomb protein EED insertion domain
PF22063Pdc1_Ge1Pdc1 Ge1 domain
PF22107Pch2_NPch2 N-terminal domain
PF22130Phage_gp38Lactococcus phage gp38-like protein
PF22159PSMA-like_NMaltose-forming alpha-amylase-like, N-terminal domain
PF22160PSMA-like_CMaltose-forming alpha-amylase-like, C-terminal domain
PF22162PFINPlasmid Fertility inhibition factor
PF22167PH0730-like_NPH0730-like, N-terminal domain
PF22177PBP1_XylRXylR N-terminal domain
PF22233PhyR_sigma-likeResponse regulator PhyR, sigma-like domain
PF22241PSMD12-CSN4_NPSMD12/CSN4, N-terminal
PF22250PFF1_CVacuolar membrane protease, C-terminal domain
PF22251PFF1_TMVacuolar membrane protease, transmembrane domain
PF22252PNGase_F-II_NN-glycanase peptide, N-terminal domain
PF22297PccHPccH Cytochrome c
PF22315PF0095-like_CPF0095-like, C-terminal domain
PF22317PolB_NDNA polymerase II small subunit, N-terminal domain
PF22337Phage_fiber_rptPhage tail fiber repeats
PF22338Pyruv_OxRed_insertionPyruvate-ferredoxin oxidoreductase, insertion domain
PF22353PF1197-like_CNAD(P)H:rubredoxin oxidoreductase, C-terminal domain
PF22365PfNDH2_hel_insPfNDH2 helical insertion domain
PF22384PBP2_Ca3427_likeCa3427-like PBP
PF22386PPIProtease propeptides/inhibitors
PF22408PsV_CP_CPsV, capsid protein, C-terminal domain
PF22432PA2794-like_CPA2794-like, C-terminal
PF22434PilW_CPilW, C-terminal
PF22436PilE_CPilE, C-terminal
PF22444PaaX-like_Fer-likePaaX-like, ferredoxin-like domain
PF22454PQQ_syn_pqqF_N_2PQQ synthase PqqF, N-terminal lobe domain 2
PF22455PqqF_C_3PQQ synthase PqqF, C-terminal lobe domain 3
PF22456PqqF-like_C_4PQQ synthase PqqF-like, C-terminal lobe domain 4
PF22457PpPFK_gamma-like_CATP-dependent 6-phosphofructokinase subunit gamma, C-terminal
PF22459PrgX_C_TPRPheromone cCF10 receptor, C-terminal TPR region
PF22466PSF3_NPSF3 N-terminal domain
PF22473PilJ_PilinPilJ, Pilin domain
PF22479Pam3_gp18Cyanophage baseplate Pam3 plug gp18
PF22493PUF_NOP9NOP9-like PUF repeat domain
PF22511PBP2PolB1 Binding Protein 2
PF22516PreP_CPreP C-terminal domain
PF22528PRMT_CArginine methyltransferase oligomerization subdomain
PF22536POLR3C_WHDPOLR3C, C-terminal winged-helix domain
PF22631PLCB1-4-like_EFhPhosphoinositide phospholipase C beta1-4-like EF-hand domain
PF22634POL2_thumbDNA polymerase epsilon catalytic subunit A, thumb domain
PF22646PPP2R1A-like_HEATPPP2R1A-like HEAT repeat
PF22696Putative_PNPOx_2Pyridoxamine 5'-phosphate oxidase-like
PF22740PapZ_CRapZ C-terminal domain
PF22741PTP-NADKDSP-PTPase phosphatase fused to NAD+ Kinase
PF22742PspABPspA associated protein B
PF22743PspAAPspA-Associated protein
PF22748PexRD54_WYEffector PexRD54, WY-domain
PF22758Phage_cementStructural cement protein (E217 gp24/Pam3 gp6)
PF22770POP1_CPOP1 C-terminal domain
PF22784PTP-SAKSwiss Army Knife protein, DSP-PTPase phosphatase domain
PF22799PIR1-like_CCell wall mannoprotein PIR1-like, C-terminal domain
PF22826PL28PL28 ulvan lyases
PF22832PsaO_TMDPsaO transmembrane domain
PF22834Polo_box_4Polo box domain
PF22842Pel9A-like_beta_helixPel9A-like, right handed beta helix region
PF22869PssLProtein PssL
PF22908PHD_NSDHistone-lysine N-methyltransferase NSD-like, PHD zinc finger
PF22911PRAS_NTProline-rich AKT1 substrate 1, N-terminal domain
PF22917PRISEPRISE-like Rossmann-fold domain
PF22918PTEN2_C2PTEN2, C2 domain
PF22930PDXDC1-like_cenPDXDC1-like central domain
PF22936Pol_BBDPol polyprotein, beta-barrel domain
PF22937PDXDC1-like_cen2PDXDC1-like second central domain
PF22988PWWP_KDM3BLysine-specific demethylase 3B, PWWP domain
PF23002PIN-like_DDX60ATP-dependent RNA helicase DDX60, PIN-like domain
PF23004PHDvar_NSDHistone-lysine N-methyltransferase NSD-like, variant PHD zinc finger
PF23011PHD-1st_NSDHistone-lysine N-methyltransferase NSD-like, PHD zinc finger 1
PF23014PH_Tiam1Tiam1 second PH domain-like
PF23020PEX14-like_2ndPeroxisomal membrane protein PEX14-like, central
PF23040PH_SSH1-like_1stProtein phosphatase Slingshot homolog 1-like, PH domain-like
PF23065PH_SMPaPH domain associated with SMP domain
PF23066PH_21C-Maf-inducing protein PH domain
PF23074PH_FT_NPH domain found in tandem in fungal proteins
PF23076PH_FT_CPH domain found in tandem in fungal proteins
PF23112PUB62-63_CU-box protein 62/63 C-terminal
PF23120PEX6_NPeroxisomal ATPase 6 N-terminal
PF23142PH_PLEKHM2PLEKHM2 PH domain-like
PF23182PABC_AtC3H46AtC3H46 PABC domain
PF23198PDE8A_NPDE8A-like, N-terminal domain
PF23202PAH_ZNF598ZNF598 PAH domain
PF23206PCDH15_12thPCDH15-like domain
PF23207PH_SPO71Prospore membrane adapter protein SPO71 PH domain
PF23218PH_AIR9AIR9 PH-like domain
PF23278Piwi_NPiwi, N-terminal domain
PF23315PEX6_4thPEX6 fourth domain
PF23322PPIase_AIPAH receptor-interacting protein, N-terminal FKBP-type PPIase
PF23337PTHB1_pfPTHB1 platform domain
PF23338PTHB1_hpPTHB1 hairpin
PF23339PTHB1_CtHPTHB1 C-terminal helix bundle
PF23341PEP5_VPS11_NPEP5/VPS11 N-terminal
PF23552ParB_dimerParB dimerisation domain
PF23570PHD_P300Histone acetyltransferase p300-like, PHD domain
PF23633PH_GEF_YEL1Guanine-nucleotide exchange factor YEL1 PH domain
PF23634PH_CERLI1CERLI1-like PH domain
PF23658PDZ_CPAF_relCPAF-like PDZ domain
PF23670PIGBOS1PIGBOS1-like
PF23699PACMPPAR-amplifying and CtIP-maintaining micropeptide
PF23707P116P116-like protein
PF23732PH_22PH domain
PF23778Phage_holin_2Putative phage holin family 2
PF23781Phage_TAC_16Phage tail assembly chaperone protein
PF23789Pre_tape_measurePre-tape measure protein
PF23794Phage_Gp84Mycobacterium phage Gp84-like protein
PF23803Phage_TAC_17Phage tail assembly chaperone
PF23806Phage_TTP_14Phage tail tube protein
PF23809Phage_holin_9Bacteriophage holin
PF23812Phage_TAC_18Phage tail assembly chaperone
PF23840Phage_tail_terminatorPhage tail terminator protein
PF23841Phage_tail_terminator_2Phage tail termination protein
PF23842Phage_tail_terminator_3Phage tail termination protein
PF23857Phage_TAC_19Phage tail chaperone protein
PF23887Phage_Gene47Phage L5 gene 47-like protein
PF23895Phage_zn_bindPhage zinc binding domain
PF23900PRS2_NPRS2 N-terminal domain
PF23943PUS7L_NPUS7L N-terminal domain
PF23961Phage_tail_terminator_9Phage neck terminator protein
PF23968Phage_cement_3Phage cement protein
PF23977Pam3_Gp34Pam3 phage gp34-like protein
PF23980Phage_tail_tube_initPutative phage tail tube initiator protein
PF23982Phage_cement_4Putative phage cement protein
PF23983P11_CMinor capsid protein P11, C-terminal conserved region
PF23986Pam3_gp59Phage Pam3 gp59 related protein
PF23987Phage_holin_10Bacteriophage holin Pam3 gp28 family
PF23989PilB3_CPilB3-like, C-terminal
PF23990PilB3_NPilB3-like, N-terminal
PF23992Pam3_gp32Phage Pam3 gp32-like protein
PF24055POL3_NDNA polymerase delta catalytic subunit-like, N-terminal domain
PF24071Phage_zn_bind_3Phage FDXHR zinc binding domain
PF24081PH_SLA1SLA1-like, PH domain-like
PF24083Phage_ssDNA_bindPutative phage ssDNA-binding domain
PF24168PB4_spikeStraight fiber protein PB4 spike domain
PF24203Phage_ProQ_C_likePhage ProQ C-terminal-like domain
PF24229Phage_TreKStaphylococcus phage terminal repeat-encoded protein TreK
PF24243Phage_tail_CPhage tail tip domain
PF24305P8Probiotic-derived P8 protein
PF24313ParatoxParatox
PF24317PSI_Plexin-BPlexin-B, PSI domain
PF24344PH_23PH domain
PF24345PH_24EVH1 domain-like
PF24388Permuted_GreAB-CPermuted GreAB-C
PF24390PRTase-CEPRTase-CE
PF24392Parb-CEParB-CE
PF24393PepcoPepco
PF24405Pua-likePua-like
PF24428PYCO1_repeatPYCO1 Rubisco-binding repeat
PF24479PSI_PlexinA-BPlexin A/B, PSI domain
PF24579PDDEXK_14Phage putative PDDEXK endonuclease
PF24591Phage_YunG-likePhage YunG-like protein
PF24608PDDEXK_15Phage putative PDDEXK endonuclease
PF24617POF1B_HlHPOF1B helix-loop-helix domain
PF24623Phage_zn_bind_8Putative DNA-binding phage zinc finger domain
PF24627PUMA_CCPUMA coiled-coil
PF24630PIN_TASORTASOR PIN domain
PF24653Phage_OMPCyanophage outer membrane protein like beta barrel domain
PF24660PGAP1_3rdGPI inositol-deacylase beta-sandwich domain
PF24695PITM1-3PITM 1-3, beta-sandwich domain
PF24732ParE_likeParE-like toxin domain
PF24799Paxt-1_CPartner of xrn-2 protein 1-like, C-terminal domain
PF24818PH_TRF2_HOY1TRF2/HOY1 PH-like domain
PF24823PH_RDR2RDR2 PH-like domain
PF24824PH_SPT16FACT complex subunit SPT16 PH-like domain
PF24829Phage_connect_2Phage connector protein
PF24844PolC_DP2_centralDNA polymerase II large subunit DP2, central domain
PF24846PolC_DP2_catDNA polymerase II large subunit DP2, catalytic domain


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