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Alphabetical List of Domains

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ABCDEFGHIJKLMNOPQRSTUVWXYZ





Domains (311)
PFAM UNIPROT
PF00021UPAR_LY6u-PAR/Ly-6 domainP13987
PF00179UQ_conUbiquitin-conjugating enzymeP68036
PF00201UDPGTUDP-glucoronosyl and UDP-glucosyl transferaseQ9SBL1
PF00240ubiquitinUbiquitin familyQ15459
PF00443UCHUbiquitin carboxyl-terminal hydrolaseQ70CQ3
PF00449Urease_alphaUrease alpha-subunit, N-terminal domainP41020
PF00547Urease_gammaUrease, gamma subunitP41022
PF00577UsherOuter membrane usher proteinP07110
PF00580UvrD-helicaseUvrD/REP helicase N-terminal domainA0A024LB08
PF00582UspUniversal stress protein familyA0A0H2Z9V8
PF00627UBAUBA/TS-N domainP27448
PF00699Urease_betaUrease beta subunitP41021
PF00789UBXUBX domainO35987
PF00919UPF0004Uncharacterized protein family UPF0004A0A174GYG1
PF00984UDPG_MGDP_dhUDP-glucose/GDP-mannose dehydrogenase family, central domainQ0P8H3
PF01014UricaseUricaseQ00511
PF01040UbiAUbiA prenyltransferase familyG3IEF0
PF01099UteroglobinUteroglobin familyP11684
PF01170UPF0020RMKL-like, methyltransferase domainO29011
PF01175UrocanaseUrocanase Rossmann-like domainA0A0Q9KFZ4
PF01205UPF0029Uncharacterized protein family UPF0029P25637
PF01208URO-DUroporphyrinogen decarboxylase (URO-D)B2FQJ0
PF01209Ubie_methyltranubiE/COQ5 methyltransferase familyQ4X158
PF01704UDPGPUTP--glucose-1-phosphate uridylyltransferaseQ4WAM5
PF01730UreFUreFA6TE44
PF01774UreDUreD urease accessory proteinQ09067
PF01893UPF0058Uncharacterised protein family UPF0058Q9HQM9
PF01894UPF0047Uncharacterised protein family UPF0047Q9YBS9
PF01977UbiD3-octaprenyl-4-hydroxybenzoate carboxy-lyase Rift-related domainA0A0N9Y7U2
PF02021UPF0102Uncharacterised protein family UPF0102Q6NCZ4
PF02083Urotensin_IIUrotensin IIO95399
PF02151UVRUvrB/uvrC motifP37954
PF02271UCR_14kDUbiquinol-cytochrome C reductase complex 14kD subunitA0A1S3U9J1
PF02320UCR_hingeUbiquinol-cytochrome C reductase hinge proteinA0A1S3VHC0
PF02393US22US22 like
PF02614UxaCGlucuronate isomeraseD5SMT1
PF02694UPF0060Uncharacterised BCR, YnfA/UPF0060 family
PF02809UIMUbiquitin interaction motifP55036
PF02814UreE_NUreE urease accessory protein, N-terminal domainP50049
PF02921UCR_TMUbiquinol cytochrome reductase transmembrane regionA0A1S3TB49
PF02939UcrQUcrQ familyQ6C387
PF03152UFD1_N1Ubiquitin fusion degradation protein UFD1, N-terminal subdomain 1P53044
PF03167UDGUracil DNA glycosylase superfamilyP13051
PF03253UTUrea transporterQ13336
PF03350UPF0114Uncharacterized protein family, UPF0114
PF03456uDENNuDENN domainQ8TEH3
PF03649UPF0014Uncharacterised protein family (UPF0014)
PF03653UPF0093Uncharacterised protein family (UPF0093)
PF03657UPF0113UPF0113 PUA domainQ1MTQ9
PF03658Ub-RnfHRnfH family UbiquitinQ4QNE7
PF03665UPF0172Uncharacterised protein family (UPF0172)O43402
PF03670UPF0184Uncharacterised protein family (UPF0184)
PF03671Ufm1Ubiquitin fold modifier 1 proteinP61960
PF03672UPF0154Uncharacterised protein family (UPF0154)
PF03673UPF0128Uncharacterised protein family (UPF0128)
PF03677UPF0137Uncharacterised protein family (UPF0137)
PF03682UPF0158Uncharacterised protein family (UPF0158)
PF03683UPF0175Uncharacterised protein family (UPF0175)
PF03684UPF0179Uncharacterised protein family (UPF0179)
PF03685UPF0147Uncharacterised protein family (UPF0147)Q6LY05
PF03686UPF0146Uncharacterised protein family (UPF0146)O27081
PF03687UPF0164Uncharacterised protein family (UPF0164)
PF03691UPF0167Uncharacterised protein family (UPF0167)
PF03695UPF0149Uncharacterised protein family (UPF0149)Q5ZZD5
PF03698UPF0180Uncharacterised protein family (UPF0180)
PF03699UPF0182Uncharacterised protein family (UPF0182)
PF03701UPF0181Uncharacterised protein family (UPF0181)
PF03720UDPG_MGDP_dh_CUDP-glucose/GDP-mannose dehydrogenase family, UDP binding domainQ0P8H3
PF03721UDPG_MGDP_dh_NUDP-glucose/GDP-mannose dehydrogenase family, NAD binding domainQ0P8H3
PF03786UxuAD-mannonate dehydratase (UxuA)P24215
PF03851UvdEUV-endonuclease UvdEQ4J9T1
PF03981Ubiq_cyt_C_chapUbiquinol-cytochrome C chaperone
PF03998Utp11Utp11 proteinB5VM59
PF04003Utp12Dip2/Utp12 FamilyP25635
PF04050Upf2Up-frameshift suppressor 2Q9HAU5
PF04115Ureidogly_lyaseUreidoglycolate lyaseP59285
PF04192Utp21Utp21 specific WD40 associated putative domainQ06078
PF04297UPF0122Putative helix-turn-helix protein, YlxM / p13 likeP67248
PF04564U-boxU-box domainQ9UMS4
PF04615Utp14Utp14 proteinQ9BVJ6
PF04869Uso1_p115_headUso1 / p115 like vesicle tethering protein, head regionP25386
PF04871Uso1_p115_CUso1 / p115 like vesicle tethering protein, C terminal region
PF04884UVB_sens_protVitamin B6 photo-protection and homoeostasis domain
PF05194UreE_CUreE urease accessory protein, C-terminal domainP50049
PF05216UNC-50UNC-50 family
PF05234UAF_Rrn10UAF complex subunit Rrn10P38204
PF05250UPF0193Uncharacterised protein family (UPF0193)
PF05254UPF0203Uncharacterised protein family (UPF0203)O43715
PF05255UPF0220Uncharacterised protein family (UPF0220)
PF05256UPF0223Uncharacterised protein family (UPF0223)Q9K9K7
PF05348UMP1Proteasome maturation factor UMP1P38293
PF05365UCR_UQCRX_QCR9Ubiquinol-cytochrome C reductase, UQCRX/QCR9 likeA0A1S3TQD2
PF05473UL45UL45 protein, carbohydrate-binding C-type lectin-like
PF05685Uma2Putative restriction endonucleaseQ04QG8
PF05722Ustilago_matingUstilago B locus mating-type protein
PF05727UPF0228Uncharacterised protein family (UPF0228)
PF05728UPF0227Uncharacterised protein family (UPF0227)O68216
PF05743UEVUEV domainQ99816
PF05822UMPH-1Pyrimidine 5'-nucleotidase (UMPH-1)Q969T7
PF05978UNC-93Ion channel regulatory protein UNC-93Q8VCW4
PF06062UPF0231Uncharacterised protein family (UPF0231)
PF06181Urate_ox_NUrate oxidase N-terminal
PF06233UsgUsg-like family
PF06427UDP-g_GGTaseUDP-glucose:Glycoprotein GlucosyltransferaseG0SB58
PF06603UpxZUpxZ family of transcription anti-terminator antagonistsA7V9P0
PF06782UPF0236Uncharacterised protein family (UPF0236)
PF06783UPF0239Uncharacterised protein family (UPF0239)
PF06784UPF0240Uncharacterised protein family (UPF0240)
PF06785UPF0242Uncharacterised protein family (UPF0242) N-terminus
PF06786UPF0253Uncharacterised protein family (UPF0253)P0A8K7
PF06788UPF0257Uncharacterised protein family (UPF0257)
PF06790UPF0259Uncharacterised protein family (UPF0259)
PF06792UPF0261Uncharacterised protein family (UPF0261) N-terminal domainA7M6E7
PF06793UPF0262Uncharacterised protein family (UPF0262)
PF06794UPF0270Uncharacterised protein family (UPF0270)Q9HYE3
PF06862Utp25_CUtp25, C-terminal domain
PF07168Ureide_permeaseUreide permease
PF07353Uroplakin_IIUroplakin II
PF07539UTP20_NU3 small nucleolar RNA-associated protein 20, N-terminalP35194
PF07593UnbV_ASPICASPIC and UnbV
PF07702UTRAUTRA domainQ9K492
PF08064UMEUME (NUC010) domainP38111
PF08297U3_snoRNA_assocU3 snoRNA associatedQ08492
PF08449UAAUAA transporter familyP40107
PF08459UvrC_RNaseH_domUvrC RNAse H endonuclease domainQ9RUN0
PF08587UBA_2Ubiquitin associated domain (UBA)O74536
PF08594UPF0300Uncharacterised protein family (UPF0300)
PF08625Utp13Utp13 specific WD40 associated domainQ05946
PF08640U3_assoc_6U3 small nucleolar RNA-associated protein 6Q9NYH9
PF08694UFC1Ubiquitin-fold modifier-conjugating enzyme 1Q9Y3C8
PF08864UPF0302UPF0302 domainQ81SV3
PF08941USP8_interactUSP8 interactingQ8BH75
PF08969USP8_dimerUSP8 dimerisation domainO95630
PF08997UCR_6-4kDUbiquinol-cytochrome C reductase complex, 6.4kD proteinP07552
PF09138Urm1Urm1 (Ubiquitin related modifier)G0SE11
PF09145Ubiq-assocUbiquitin-associatedQ06677
PF09165Ubiq-Cytc-red_NUbiquinol-cytochrome c reductase 8 kDa, N-terminalP13272
PF09288UBA_3Fungal ubiquitin-associated domainP21734
PF09333unknown:not in list
PF09384UTP15_CUTP15 C terminalQ04305
PF09416UPF1_Zn_bindRNA helicase (UPF2 interacting domain)P30771
PF09720Unstab_antitoxPutative addiction module component
PF09753Use1Membrane fusion protein Use1Q6CL08
PF10293unknown:not in list
PF10305unknown:not in list
PF10347unknown:not in list
PF10351unknown:not in list
PF10359unknown:not in list
PF10395Utp8_b_propellerUtp8, N-terminal beta propellerP53276
PF10399UCR_Fe-S_NUbiquitinol-cytochrome C reductase Fe-S subunit TAT signalQ02762
PF10408Ufd2P_coreUbiquitin elongating factor coreP54860
PF10441Urb2Urb2/Npa2 family
PF10479unknown:not in list
PF10506USHBP1_PDZ-bdHarmonin-binding protein USHBP1, PDZ-binding domain
PF10571UPF0547Uncharacterised protein family UPF0547
PF10572UPF0556UPF0556 domainQ969H8
PF10573UPF0561Uncharacterised protein family UPF0561
PF10574UPF0552Arp2/3-interacting proteins Arpin
PF10585UBA_E1_SCCHUbiquitin-activating enzyme, SCCH domainP22515
PF10596U6-snRNA_bdgU6-snRNA interacting domain of PrP8Q6P2Q9
PF10597U5_2-snRNA_bdgU5-snRNA binding site 2 of PrP8Q6P2Q9
PF10625UspBUniversal stress protein B (UspB)
PF11094UL11Membrane-associated tegument protein
PF11543UN_NPL4Nuclear pore localisation protein NPL4Q9VBP9
PF11701UNC45-centralMyosin-binding striated muscle assembly centralG5EG62
PF11703UPF0506UPF0506
PF11803UXS1_NUDP-glucuronate decarboxylase N-terminal
PF11807UstYaMycotoxin biosynthesis protein UstYa
PF12220U1snRNP70_NU1 small nuclear ribonucleoprotein of 70kDa MW N terminalQ00916
PF12344UvrBUltra-violet resistance protein BP56981
PF12397U3snoRNP10U3 small nucleolar RNA-associated protein 10Q9H583
PF12436USP7_ICP0_bdgICP0-binding domain of Ubiquitin-specific protease 7Q93009
PF12478UBAP2-LigUBAP2/protein lingerer
PF12640UPF0489UPF0489 domainD8G6F7
PF13109unknown:not in list
PF13361UvrD_CUvrD-like helicase C-terminal domainA0A024LB08
PF13423UCH_1Ubiquitin carboxyl-terminal hydrolaseP53010
PF13502unknown:not in list
PF13538UvrD_C_2UvrD-like helicase C-terminal domainP04993
PF13980UPF0370Uncharacterised protein family (UPF0370)
PF14075UBN_ABUbinuclein conserved middle domain
PF14377UBMUbiquitin binding regionQ7Z6Z7
PF14451Ub-Mut7CMut7-C ubiquitin
PF14533USP7_C2Ubiquitin-specific protease C-terminalQ93009
PF14555UBA_4UBA-like domainO35987
PF14560Ubiquitin_2Ubiquitin-like domainO13255
PF14681UPRTaseUracil phosphoribosyltransferaseQ59QT3
PF14732UAE_UbLUbiquitin/SUMO-activating enzyme ubiquitin-like domainQ9UBT2
PF14776UNC-79Cation-channel complex subunit UNC-79Q9P2D8
PF14814UB2HBifunctional transglycosylase second domainP02919
PF14836Ubiquitin_3Ubiquitin-like domainP51784
PF14982UPF0731UPF0731 family
PF15086UPF0542Uncharacterised protein family UPF0542
PF15092UPF0728Uncharacterised protein family UPF0728
PF15114UPF0640Uncharacterised protein family UPF0640
PF15117UPF0697Uncharacterised protein family UPF0697
PF15135UPF0515Uncharacterised protein UPF0515
PF15136UPF0449Uncharacterised protein family UPF0449
PF15141UQCC3Ubiquinol-cytochrome-c reductase complex assembly factor 3
PF15435UNC119_bdgUNC119-binding protein C5orf30 homologue
PF15456Uds1Up-regulated During Septation
PF15475UPF0444Transmembrane protein C12orf23, UPF0444
PF15744UPF0492Uncharacterized protein family UPF0492
PF15750UBZ_FAAP20Ubiquitin-binding zinc-fingerQ6NZ36
PF15772UPF0688UPF0688 family
PF15778UNC80_NUNC80 N-terminalQ8N2C7
PF15823UPF0524UPF0524 of C3orf70
PF15827UPF0730UPF0730 unknown protein family
PF15972UnpairedUnpaired protein
PF15990UPF0767UPF0767 family
PF16195UBA2_CSUMO-activating enzyme subunit 2 C-terminusQ9UBT2
PF16257UxaEtagaturonate epimerase
PF16455UBDUbiquitin-binding domainQ8WUN7
PF16534ULDUbiquitin-like oligomerisation domain of SATBQ60611
PF16577UBA_5UBA domainQ64337
PF16602USP19_linkerLinker region of USP19 deubiquitinase
PF16674UCH_NN-terminal of ubiquitin carboxyl-terminal hydrolase 37Q86T82
PF16678UBA_HOIPHOIP UBA domain pairQ96EP0
PF16909unknown:not in list
PF16910unknown:not in list
PF16975UPAR_LY6_2Ly6/PLAUR domain-containing protein 6, Lypd6Q8NI32
PF17065UPF0669Putative cytokine, C6ORF120
PF17085UCMAUnique cartilage matrix associated protein
PF17094UPF0715Uncharacterised protein family (UPF0715)
PF17217UPAUPA domainO08722
PF17271Usher_TcfCTcfC Usher-like barrel domain
PF17391Urocanase_NUrocanase N-terminal domainA0A0Q9KFZ4
PF17392Urocanase_CUrocanase C-terminal domainA0A0Q9KFZ4
PF17638UL42HCMV UL42
PF17755UvrA_DNA-bindUvrA DNA-binding domainP9WQK7
PF17757UvrB_interUvrB interaction domainP30958
PF17760UvrA_interUvrA interaction domainP0A698
PF17773UPF0176_NUPF0176 acylphosphatase like domainQ5ZRP2
PF17809UPA_2UPA domainP16157
PF18031UCH_CUbiquitin carboxyl-terminal hydrolasesQ92560
PF18036Ubiquitin_4Ubiquitin-like domainQ8VIK1
PF18037Ubiquitin_5Ubiquitin-like domainQ9Y5A7
PF18039UBA_6UBA-like domainQ5D1E7
PF18141UPF1_1B_domRNA helicase UPF1, 1B domainQ92900
PF18473Urease_linkerUrease subunit beta-alpha linker domainP07374
PF18792UspA1_repUbiquitous surface protein adhesin repeatQ9XD56
PF19026UBA_HYPKHYPK UBA domainQ13765
PF19424UNC80Protein UNC80 central regionQ8N2C7
PF19718USP47_CUbiquitin carboxyl-terminal hydrolase 47 C-terminal
PF19785UPF0738Family of unknown function (UPF0738)
PF20180UQCC2_CBP6Complex III assembly factor UQCC2/CBP6
PF20262UNC80_CProtein UNC80 C-terminal regionQ8N2C7
PF20416UTP20U3 small nucleolar RNA-associated protein 20 domainP35194
PF20513UBactProkaryotic ubiquitin-like protein UBact
PF20582UPF0758_NUPF0758 N-terminal
PF20695UbiD_N3-octaprenyl-4-hydroxybenzoate carboxy-lyase N-terminal domain
PF20696UbiD_C3-octaprenyl-4-hydroxybenzoate carboxy-lyase C-terminal domain
PF20867UVSSA_NUVSSA N-terminal domain
PF20908UfSP2_NUbiquitin-fold modifier 1 specific protease 2, N-terminal
PF21115UBA_BRSKBRSK1/2 UBA domain
PF21219USH1C_NHarmonin, N-terminal domain
PF21235UBA_ARI1E3 ubiquitin-protein ligase ARIH1, UBA-like domain
PF21241UvsW_NDNA helicase UvsW, N-terminal
PF21246Usp38-like_NUbiquitin carboxyl-terminal hydrolase 38-like, N-terminal domain
PF21267UBAP-1_UBA2Ubiquitin-associated protein 1, UBA2 domain
PF21290UBA_BIRC2-3BIRC2/3-like, UBA domain
PF21594UBA_MELKMaternal embryonic leucine zipper kinase, UBA domain
PF21675unknown:not in list
PF21676unknown:not in list
PF21677unknown:not in list
PF21679unknown:not in list
PF21748UPF0150UPF0150-like
PF21909USP_UIM_NUbiquitin-specific protease UIM domain
PF22040U9-ORFSecreted glycosylated protein U9-ORF
PF22084UfSP_MPN_NUfm1 specific protease UfSP N-terminal MPN domain
PF22542Utp8_CUtp8, C-terminal
PF22562UBA_7UBA-like domain
PF22566UBA_8UBA-like domain
PF22567UBA_9UBA-like domain
PF22583UPF0425_CUPF0425 C-terminal domain
PF22866unknown:not in list
PF22893ULD_2Ubiquitin-like domain
PF22900UCH_UBL1Ubiquitin carboxyl-terminal hydrolases, Ubiquitin-like 1
PF22916UTP25_NTPase-likeUTP25, NTP hydrolase-like domain
PF22920UvrC_RNaseHUvrC Ribonuclease H-like domain
PF22932Ubiq_DUF_assocDUF569 associated ubiquitin-like domain
PF22947ULD_3Leucine--tRNA ligase, ubiquitin-like domain
PF22960UBR1-like_wingE3 ubiquitin-protein ligase UBR1-like, winged-helix domain
PF23009UBC_likeUbiquitin conjugating domain-like
PF23053UBA_N4BP1N4BP1, UBA-like domain
PF23054UBA_N4BP1_CN4BP1, C-terminal UBA domain
PF23072unknown:not in list
PF23092Ubiquitin_6Neuron navigator 1-like, ubiquitin-like domain
PF23099UTP20_CSmall subunit processome component 20 homolog, C-terminal
PF23149UBA_Crd2Cdr2 UBA domain
PF23164UBL_AVO1AVO1 ubiquitin-like domain
PF23187UBX7_NUBX7 N-terminal domain
PF23189UPF0261_CUncharacterised protein family (UPF0261) C-terminal domain
PF23195UBQLN1Ubiquilin-1-like domain
PF23312UBA_SIK3Protein kinase SIK3 UBA domain
PF23326UBL_UBAC1UBAC1 UBL-like domain
PF23567Ubiquitin_IARS1Isoleucine--tRNA ligase, cytoplasmic, ubiquitin-like
PF23603Ubiquitin_TPR1Telomere repeat-binding protein 1-like, ubiquitin-like domain
PF23625UIM_2Ubiquitin interaction motif
PF23640UPA_SH3BP4SH3BP4 UPA domain
PF23656unknown:not in list
PF23659UFL1E3 UFM1-protein ligase 1-like domain
PF23679UPA-FIINDUPA-FIIND domain
PF24079UBR4E3 ubiquitin-protein ligase UBR4-like domain
PF24160UVB_sens_CRoot UVB sensitive protein, C-terminal
PF24543Usp-48Usp-48 domain
PF24559UBA_RAD5ADNA repair protein RAD5A UBA domain
PF24696UGSCUGSC family
PF24767UBA_At5g58720At5g58720 UBA-like domain
PF24779UTP23_sensorUTP23 sensor motif
PF24842UFD1_N2Ubiquitin fusion degradation protein UFD1, N-terminal subdomain 2


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